RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CNOT6LQ96LI5 555 aaKnown RBP12.28□□□□□ -0.44
BRCA1-213ENST00000476777 EVLQ9UI08 416 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-213ENST00000476777 KLK13Q9UKR3 277 aa12.28□□□□□ -0.44
BRCA1-213ENST00000476777 URB1O60287 2271 aaKnown RBP12.28□□□□□ -0.44
BRCA1-213ENST00000476777 GOLGA4Q13439 2230 aaKnown RBP12.27□□□□□ -0.44
BRCA1-213ENST00000476777 A0A0B4J269 797 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 ANTXRLA6NF34 631 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 K7EQS6 105 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 TAF4O00268 1085 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 CYB561D2O14569 222 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 HNRNPDLO14979 420 aaKnown RBP12.27□□□□□ -0.45
BRCA1-213ENST00000476777 KALRNO60229 2985 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 CSH1P0DML2 217 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 CSH2P0DML3 217 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 GPR15P49685 360 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 LIG4P49917 911 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 TOB1P50616 345 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-213ENST00000476777 NCKAP1LP55160 1127 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 FAM160A1Q05DH4 1040 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 LMAN2Q12907 356 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 TMEM132DQ14C87 1099 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 TRIM61Q5EBN2 209 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 WSCD1Q658N2 575 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 METTL23Q86XA0 190 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 THEM5Q8N1Q8 247 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 MDGA1Q8NFP4 955 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 CCDC26Q8TAB7 109 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 ATP2A3Q93084 1043 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 SLC22A12Q96S37 553 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 PYM1Q9BRP8 204 aaKnown RBP12.27□□□□□ -0.45
BRCA1-213ENST00000476777 TMLHEQ9NVH6 421 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 CPSF3Q9UKF6 684 aaKnown RBP12.27□□□□□ -0.45
BRCA1-213ENST00000476777 MAGED2Q9UNF1 606 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-213ENST00000476777 WNT6Q9Y6F9 365 aa12.27□□□□□ -0.45
BRCA1-213ENST00000476777 MAST4O15021 2626 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 KNTC1P50748 2209 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 NPHP3-ACAD11A0A0J9YXS1 232 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 SPAARA0A1B0GVQ0 90 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 H0YCG3 227 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 PIGRP01833 764 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 IFNAR2P48551 515 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 SLC12A3P55017 1021 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 SEC13P55735 322 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 USP4Q13107 963 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 ZRSR1Q15695 479 aaKnown RBP12.26□□□□□ -0.45
BRCA1-213ENST00000476777 CRY1Q16526 586 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 C2orf27AQ580R0 203 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 SDHAF4Q5VUM1 108 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 PIP4P1Q86T03 277 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 DCP1BQ8IZD4 617 aaKnown RBP12.26□□□□□ -0.45
BRCA1-213ENST00000476777 SYT2Q8N9I0 419 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-213ENST00000476777 FBXO18Q8NFZ0 1043 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 OLIG1Q8TAK6 271 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 MYRFLQ96LU7 910 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 PNMA5Q96PV4 448 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 FNBP1Q96RU3 617 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 CYP2S1Q96SQ9 504 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 PI4K2AQ9BTU6 479 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 MSTO1Q9BUK6 570 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 LINC00597Q9H2U6 94 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 SLC32A1Q9H598 525 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 TMEM206Q9H813 350 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 TMEM74BQ9NUR3 256 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 KCND2Q9NZV8 630 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 MMP17Q9ULZ9 603 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 NOL7Q9UMY1 257 aaKnown RBP12.26□□□□□ -0.45
BRCA1-213ENST00000476777 DERAQ9Y315 318 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 PCDHB6Q9Y5E3 794 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 PCDHB5Q9Y5E4 795 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 TCHHQ07283 1943 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 ANAPC1Q9H1A4 1944 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 MYOFQ9NZM1 2061 aa12.26□□□□□ -0.45
BRCA1-213ENST00000476777 CABIN1Q9Y6J0 2220 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 FAM221BA6H8Z2 402 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 UPK3BL1B0FP48 263 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 UPK3BL2E5RIL1 263 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 TNFRSF10BO14763 440 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
BRCA1-213ENST00000476777 CAPNS1P04632 268 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 HNRNPLP14866 589 aaKnown RBP eCLIP12.25□□□□□ -0.45
BRCA1-213ENST00000476777 ENGP17813 658 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 OPRD1P41143 372 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 PRPHP41219 470 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 MAPK8P45983 427 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 TAF6P49848 677 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 CLCN6P51797 869 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 SIM1P81133 766 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-213ENST00000476777 NR1H3Q13133 447 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 DDR2Q16832 855 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 ARSHQ5FYA8 562 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 HYIQ5T013 277 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 SLC39A4Q6P5W5 647 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 CCDC33Q8N5R6 958 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 TTC16Q8NEE8 873 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 RLN3Q8WXF3 142 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 TRMT2BQ96GJ1 504 aaKnown RBP12.25□□□□□ -0.45
BRCA1-213ENST00000476777 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms