RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 VMP1Q96GC9 406 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 TREX2Q9BQ50 279 aaPredicted RBP6.55□□□□□ -1.36
NUP58-209ENST00000476553 BRD9Q9H8M2 597 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 STARD7Q9NQZ5 370 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 VPS45Q9NRW7 570 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 OXSMQ9NWU1 459 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 NSMCE4AQ9NXX6 385 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 H2AFY2Q9P0M6 372 aaPredicted RBP6.55□□□□□ -1.36
NUP58-209ENST00000476553 TMCC3Q9ULS5 477 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 MAGED2Q9UNF1 606 aaPredicted RBP6.55□□□□□ -1.36
NUP58-209ENST00000476553 HDAC5Q9UQL6 1122 aa6.55□□□□□ -1.36
NUP58-209ENST00000476553 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 CAPN8A6NHC0 703 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 PRR5-ARHGAP8B1AHC4 643 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 FRS3O43559 492 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 HMMRO75330 724 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 TBX18O95935 607 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 IGHDP01880 384 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 FXR1P51114 621 aaKnown RBP eCLIP6.54□□□□□ -1.36
NUP58-209ENST00000476553 PLIN5Q00G26 463 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 PRKG1Q13976 671 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 CREB3L3Q68CJ9 461 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 KIAA1841Q6NSI8 718 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 ESRP1Q6NXG1 681 aaKnown RBP6.54□□□□□ -1.36
NUP58-209ENST00000476553 XYLT1Q86Y38 959 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 CACNA2D3Q8IZS8 1091 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 HIST1H2AHQ96KK5 128 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 NT5C1BQ96P26 610 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 HIST1H2AJQ99878 128 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 NOL10Q9BSC4 688 aaKnown RBP6.54□□□□□ -1.36
NUP58-209ENST00000476553 STK31Q9BXU1 1019 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 ELAC1Q9H777 363 aaKnown RBP6.54□□□□□ -1.36
NUP58-209ENST00000476553 SEMA4GQ9NTN9 838 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 GGA3Q9NZ52 723 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 NFKBIL1Q9UBC1 381 aaPredicted RBP6.54□□□□□ -1.36
NUP58-209ENST00000476553 GIMAP2Q9UG22 337 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 ABCF2Q9UG63 623 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 SLC13A4Q9UKG4 626 aa6.54□□□□□ -1.36
NUP58-209ENST00000476553 NOC2LQ9Y3T9 749 aaKnown RBP6.54□□□□□ -1.36
NUP58-209ENST00000476553 FSD2A1L4K1 749 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 A6NLC8 198 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 F5H0A9 414 aaPredicted RBP6.53□□□□□ -1.36
NUP58-209ENST00000476553 VEGFAP15692 232 aaPredicted RBP6.53□□□□□ -1.36
NUP58-209ENST00000476553 PDCP20941 246 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 C5AR1P21730 350 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 STAT1P42224 750 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 AGFG1P52594 562 aaKnown RBP6.53□□□□□ -1.36
NUP58-209ENST00000476553 SNX16P57768 344 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 SCAPQ12770 1279 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 STARD3Q14849 445 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 ANO6Q4KMQ2 910 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 MFSD4BQ5TF39 518 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 UNQ6494/PRO21346Q6UXR6 183 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 PHYKPLQ8IUZ5 450 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 SYTL1Q8IYJ3 562 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 SLC44A3Q8N4M1 653 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 OR10H5Q8NGA6 315 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 ORAI2Q96SN7 254 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 MRPL9Q9BYD2 267 aaKnown RBP6.53□□□□□ -1.36
NUP58-209ENST00000476553 BTBD1Q9H0C5 482 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 CXorf56Q9H5V9 222 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 USP36Q9P275 1121 aaKnown RBP6.53□□□□□ -1.36
NUP58-209ENST00000476553 GPR34Q9UPC5 381 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 PCDHGB2Q9Y5G2 931 aa6.53□□□□□ -1.36
NUP58-209ENST00000476553 SALL3Q9BXA9 1300 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 TSPY2A6NKD2 308 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 CGB1A6NKQ9 187 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 C19orf81C9J6K1 198 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 MGST3O14880 152 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 FFAR2O15552 330 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 IRAK2O43187 625 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 PRPF6O94906 941 aaKnown RBP6.52□□□□□ -1.37
NUP58-209ENST00000476553 HLA-DOAP06340 250 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 POLBP06746 335 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 TSPY3P0CV98 308 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 TSPY8P0CW00 308 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 AGXTP21549 392 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 LSP1P33241 339 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 DCAF7P61962 342 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 PHC1P78364 1004 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 SIM1P81133 766 aaPredicted RBP6.52□□□□□ -1.37
NUP58-209ENST00000476553 TSPY1Q01534 308 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 POLD3Q15054 466 aaPredicted RBP6.52□□□□□ -1.37
NUP58-209ENST00000476553 POSTNQ15063 836 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 MEA1Q16626 185 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 RILPL1Q5EBL4 403 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 ENOSF1Q7L5Y1 443 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 PRR18Q8N4B5 295 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 ZNF366Q8N895 744 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 ARL10Q8N8L6 244 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 APPL2Q8NEU8 664 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 IPO4Q8TEX9 1081 aaKnown RBP6.52□□□□□ -1.37
NUP58-209ENST00000476553 ASB12Q8WXK4 309 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 BRI3BPQ8WY22 251 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 MYL10Q9BUA6 226 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 ZNF277Q9NRM2 450 aaPredicted RBP6.52□□□□□ -1.37
NUP58-209ENST00000476553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.52□□□□□ -1.37
NUP58-209ENST00000476553 GRHPRQ9UBQ7 328 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 CORO2BQ9UQ03 480 aa6.52□□□□□ -1.37
NUP58-209ENST00000476553 H7C1D1 291 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms