RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 SUV39H1O43463 412 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 TSPAN1O60635 241 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 ZNF883P0CG24 379 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 SYKP43405 635 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 SETQ01105 290 aaPredicted RBP7.04□□□□□ -1.28
CLDN4-205ENST00000476494 BNC1Q01954 994 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 ZNF33AQ06730 810 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 AMHR2Q16671 573 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 TRIM68Q6AZZ1 485 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 SHC4Q6S5L8 630 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 ANKS3Q6ZW76 656 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 RABEPKQ7Z6M1 372 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 TMPRSS12Q86WS5 348 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 PLA2G4DQ86XP0 818 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 FMR1NBQ8N0W7 255 aaPredicted RBP7.04□□□□□ -1.28
CLDN4-205ENST00000476494 EXD3Q8N9H8 876 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLDN4-205ENST00000476494 BAP1Q92560 729 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 ARID3AQ99856 593 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 P2RY13Q9BPV8 354 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 LPIN3Q9BQK8 851 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 CCSER1Q9C0I3 900 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 NRSN2Q9GZP1 204 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 NUP62CLQ9H1M0 184 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 EBF3Q9H4W6 596 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 IL21RQ9HBE5 538 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 CYP4F11Q9HBI6 524 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 CPNE5Q9HCH3 593 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 ASAH2Q9NR71 780 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 TBC1D22BQ9NU19 505 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 KLK14Q9P0G3 267 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 CCDC39Q9UFE4 941 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 MMP17Q9ULZ9 603 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 PCDHA12Q9UN75 941 aa7.04□□□□□ -1.28
CLDN4-205ENST00000476494 ZNF638Q14966 1978 aaKnown RBP7.04□□□□□ -1.28
CLDN4-205ENST00000476494 SPENQ96T58 3664 aaKnown RBP7.04□□□□□ -1.28
CLDN4-205ENST00000476494 DNHD1Q96M86 4753 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 A0A1B0GVL5 298 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 VWA3AA6NCI4 1184 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TRIM66O15016 1216 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 EDIL3O43854 480 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 ZNF202O95125 648 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TDP2O95551 362 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 MYF5P13349 255 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 ARSAP15289 507 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 PFKFB1P16118 471 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 LIG1P18858 919 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 AXLP30530 894 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 ELF1P32519 619 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 GJA4P35212 333 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 UBA7P41226 1012 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TXKP42681 527 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 DNM2P50570 870 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 NDUFA8P51970 172 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 ZNF445P59923 1031 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CCDC173Q0VFZ6 552 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TWF1Q12792 350 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 ZSCAN23Q3MJ62 389 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 C2orf27AQ580R0 203 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 ARHGAP40Q5TG30 622 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TPGS2Q68CL5 300 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 DHRS13Q6UX07 377 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 DEFB119Q8N690 84 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 IGSF22Q8N9C0 903 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 IQUBQ8NA54 791 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 C3orf58Q8NDZ4 430 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 BEST2Q8NFU1 509 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 PRPF31Q8WWY3 499 aaKnown RBP7.03□□□□□ -1.28
CLDN4-205ENST00000476494 LENG9Q96B70 501 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CCDC51Q96ER9 411 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 LIN37Q96GY3 246 aaPredicted RBP7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TMEM176AQ96HP8 235 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CPB2Q96IY4 423 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CLIC6Q96NY7 704 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 RIT2Q99578 217 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CDC6Q99741 560 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TMEM60Q9H2L4 133 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 TNMDQ9H2S6 317 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CUEDC2Q9H467 287 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 CLSTN2Q9H4D0 955 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 SLITRK6Q9H5Y7 841 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 MAGEF1Q9HAY2 307 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 PRDM16Q9HAZ2 1276 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 KCNMB3Q9NPA1 279 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 LRWD1Q9UFC0 647 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 BTBD3Q9Y2F9 522 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 COL4A3BPQ9Y5P4 624 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 MED13Q9UHV7 2174 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 NAV3Q8IVL0 2385 aa7.03□□□□□ -1.28
CLDN4-205ENST00000476494 ARID1BQ8NFD5 2236 aaPredicted RBP7.03□□□□□ -1.28
CLDN4-205ENST00000476494 WNT7AO00755 349 aa7.02□□□□□ -1.29
CLDN4-205ENST00000476494 SLC37A4O43826 429 aa7.02□□□□□ -1.29
CLDN4-205ENST00000476494 PRKCBP05771 671 aa7.02□□□□□ -1.29
CLDN4-205ENST00000476494 MYL1P05976 194 aa7.02□□□□□ -1.29
CLDN4-205ENST00000476494 SLFN14P0C7P3 912 aa7.02□□□□□ -1.29
CLDN4-205ENST00000476494 ITGB6P18564 788 aa7.02□□□□□ -1.29
CLDN4-205ENST00000476494 MUTP22033 750 aa7.02□□□□□ -1.29
CLDN4-205ENST00000476494 CLDN6P56747 220 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms