RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 APEX2Q9UBZ4 518 aa31.47■■■□□ 2.63
HOXB3-208ENST00000476342 PTPRDP23468 1912 aa31.46■■■□□ 2.63
HOXB3-208ENST00000476342 EPHB3P54753 998 aa31.46■■■□□ 2.63
HOXB3-208ENST00000476342 ORC1Q13415 861 aa31.46■■■□□ 2.63
HOXB3-208ENST00000476342 PHLDB3Q6NSJ2 640 aa31.46■■■□□ 2.63
HOXB3-208ENST00000476342 ENOSF1Q7L5Y1 443 aa31.46■■■□□ 2.63
HOXB3-208ENST00000476342 WHAMMQ8TF30 809 aa31.46■■■□□ 2.63
HOXB3-208ENST00000476342 TWNKQ96RR1 684 aa31.46■■■□□ 2.63
HOXB3-208ENST00000476342 ATP8B3O60423 1300 aa31.45■■■□□ 2.63
HOXB3-208ENST00000476342 ZNF394Q53GI3 561 aa31.45■■■□□ 2.63
HOXB3-208ENST00000476342 JAKMIP2Q96AA8 810 aa31.45■■■□□ 2.63
HOXB3-208ENST00000476342 UBE2TQ9NPD8 197 aaPredicted RBP31.45■■■□□ 2.63
HOXB3-208ENST00000476342 LGALS16A8MUM7 142 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 CYP2F1P24903 491 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 MAGEA11P43364 429 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 MFAP3P55082 362 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 ZNF445P59923 1031 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 IQCEQ6IPM2 695 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 VSTM1Q6UX27 236 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 TMEM176AQ96HP8 235 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 ZNF512Q96ME7 567 aaPredicted RBP31.44■■■□□ 2.62
HOXB3-208ENST00000476342 LPIN3Q9BQK8 851 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 ELOVL4Q9GZR5 314 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 CDH22Q9UJ99 828 aa31.44■■■□□ 2.62
HOXB3-208ENST00000476342 SOAT2O75908 522 aa31.43■■■□□ 2.62
HOXB3-208ENST00000476342 RPL10AP62906 217 aaKnown RBP31.43■■■□□ 2.62
HOXB3-208ENST00000476342 VEPH1Q14D04 833 aa31.43■■■□□ 2.62
HOXB3-208ENST00000476342 APTXQ7Z2E3 356 aaKnown RBP31.43■■■□□ 2.62
HOXB3-208ENST00000476342 UBR7Q8N806 425 aa31.43■■■□□ 2.62
HOXB3-208ENST00000476342 KAT5Q92993 513 aa31.43■■■□□ 2.62
HOXB3-208ENST00000476342 MED10Q9BTT4 135 aa31.43■■■□□ 2.62
HOXB3-208ENST00000476342 ASB3Q9Y575 518 aa31.43■■■□□ 2.62
HOXB3-208ENST00000476342 IL9P15248 144 aa31.42■■■□□ 2.62
HOXB3-208ENST00000476342 BDNFP23560 247 aa31.42■■■□□ 2.62
HOXB3-208ENST00000476342 ITIH5Q86UX2 942 aa31.42■■■□□ 2.62
HOXB3-208ENST00000476342 FEZF2Q8TBJ5 459 aa31.42■■■□□ 2.62
HOXB3-208ENST00000476342 B3GNT5Q9BYG0 378 aa31.42■■■□□ 2.62
HOXB3-208ENST00000476342 PCDHB4Q9Y5E5 795 aa31.42■■■□□ 2.62
HOXB3-208ENST00000476342 RAD23BP54727 409 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 KCNMA1Q12791 1236 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 FILIP1LQ4L180 1135 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 TMEM270Q6UE05 265 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 KREMEN1Q96MU8 473 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 WDR6Q9NNW5 1121 aaKnown RBP31.41■■■□□ 2.62
HOXB3-208ENST00000476342 CEP72Q9P209 647 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 DENND4AQ7Z401 1863 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 TRIM66O15016 1216 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 PTPN2P17706 415 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 ATF6P18850 670 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 ACO1P21399 889 aaKnown RBP31.41■■■□□ 2.62
HOXB3-208ENST00000476342 UBXN1Q04323 297 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 GRASPQ7Z6J2 395 aaPredicted RBP31.41■■■□□ 2.62
HOXB3-208ENST00000476342 FAM35AQ86V20 835 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 SCN4BQ8IWT1 228 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 C12orf29Q8N999 325 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 SLC4A11Q8NBS3 891 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 HEXIM2Q96MH2 286 aaKnown RBP31.41■■■□□ 2.62
HOXB3-208ENST00000476342 POMKQ9H5K3 350 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 SIX2Q9NPC8 291 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 FAM49BQ9NUQ9 324 aa31.41■■■□□ 2.62
HOXB3-208ENST00000476342 C5orf42Q9H799 3197 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 CLUHO75153 1309 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 RFX1P22670 979 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 GRIK1P39086 918 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 PABPC1LQ4VXU2 614 aaKnown RBP31.4■■■□□ 2.62
HOXB3-208ENST00000476342 TJAP1Q5JTD0 557 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 GJB7Q6PEY0 223 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 SLC2A14Q8TDB8 520 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 PSMG2Q969U7 264 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 CYFIP2Q96F07 1278 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 SMARCD1Q96GM5 515 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 PHF7Q9BWX1 381 aaPredicted RBP31.4■■■□□ 2.62
HOXB3-208ENST00000476342 LSM14BQ9BX40 385 aaKnown RBP31.4■■■□□ 2.62
HOXB3-208ENST00000476342 ZNF518BQ9C0D4 1074 aa31.4■■■□□ 2.62
HOXB3-208ENST00000476342 DNMT3BQ9UBC3 853 aaKnown RBP31.4■■■□□ 2.62
HOXB3-208ENST00000476342 MYH10P35580 1976 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 DOCK6Q96HP0 2047 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 CLDN5O00501 218 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 SERPINC1P01008 464 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 BMP1P13497 986 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 CCDC130P13994 396 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 ANXA13P27216 316 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 APBA1Q02410 837 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 TAF12Q16514 161 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 DDR2Q16832 855 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 FUKQ8N0W3 1084 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 HNRNPABQ99729 332 aaKnown RBP31.39■■■□□ 2.62
HOXB3-208ENST00000476342 CORO1BQ9BR76 489 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 ASAH2Q9NR71 780 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 HCFC1R1Q9NWW0 138 aa31.39■■■□□ 2.62
HOXB3-208ENST00000476342 PAEPP09466 180 aa31.38■■■□□ 2.61
HOXB3-208ENST00000476342 ARHGAP44Q17R89 818 aa31.38■■■□□ 2.61
HOXB3-208ENST00000476342 SMYD5Q6GMV2 418 aa31.38■■■□□ 2.61
HOXB3-208ENST00000476342 LEMD2Q8NC56 503 aa31.38■■■□□ 2.61
HOXB3-208ENST00000476342 CEP295NLQ96MC4 621 aa31.38■■■□□ 2.61
HOXB3-208ENST00000476342 PLCB1Q9NQ66 1216 aa31.38■■■□□ 2.61
HOXB3-208ENST00000476342 RHOP08100 348 aa31.37■■■□□ 2.61
HOXB3-208ENST00000476342 GPR15P49685 360 aa31.37■■■□□ 2.61
HOXB3-208ENST00000476342 KLHDC7AQ5VTJ3 777 aa31.37■■■□□ 2.61
HOXB3-208ENST00000476342 RBBP8NLQ8NC74 664 aaPredicted RBP31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms