RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PXNP49023 591 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-211ENST00000476215 WNT3P56703 355 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 LOXL3P58215 753 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 KRT17Q04695 432 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 ZNF543Q08ER8 600 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 TUBB3Q13509 450 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 GPR149Q86SP6 731 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 CCDC33Q8N5R6 958 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 SPSB4Q96A44 273 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 PTCD3Q96EY7 689 aaKnown RBP6.03□□□□□ -1.44
PTCD3-211ENST00000476215 MYD88Q99836 296 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 TOR3AQ9H497 397 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 INTS13Q9NVM9 706 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 TBCCD1Q9NVR7 557 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 ZSCAN32Q9NX65 697 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 TESQ9UGI8 421 aaKnown RBP6.03□□□□□ -1.44
PTCD3-211ENST00000476215 ITGB1BP2Q9UKP3 347 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 PACSIN3Q9UKS6 424 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 SHOC2Q9UQ13 582 aa6.03□□□□□ -1.44
PTCD3-211ENST00000476215 SPATA31A3Q5VYP0 1347 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 TRIAP1O43715 76 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 ITGAMP11215 1152 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 ZEB1P37275 1124 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-211ENST00000476215 STT3AP46977 705 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 TM4SF4P48230 202 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 ALDH5A1P51649 535 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-211ENST00000476215 RHBDL3P58872 404 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 PLA1AQ53H76 456 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 RBM20Q5T481 1227 aaKnown RBP6.02□□□□□ -1.45
PTCD3-211ENST00000476215 Q6YL49 198 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 SRLQ86TD4 932 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 VRK3Q8IV63 474 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 ASB10Q8WXI3 467 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 LINC00476Q8WZB0 136 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 SNX22Q96L94 193 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 CCDC138Q96M89 665 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 COQ10AQ96MF6 247 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 MPHOSPH6Q99547 160 aaKnown RBP6.02□□□□□ -1.45
PTCD3-211ENST00000476215 ELAC2Q9BQ52 826 aaKnown RBP6.02□□□□□ -1.45
PTCD3-211ENST00000476215 MESP1Q9BRJ9 268 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 BRIP1Q9BX63 1249 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 WDR11Q9BZH6 1224 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 SERHL2Q9H4I8 314 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 HDAC9Q9UKV0 1011 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 TBC1D30Q9Y2I9 924 aa6.02□□□□□ -1.45
PTCD3-211ENST00000476215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTCD3-211ENST00000476215 RASA4BC9J798 803 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 RASA4O43374 803 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 CD6P30203 668 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 CARSP49589 748 aaKnown RBP6.01□□□□□ -1.45
PTCD3-211ENST00000476215 SCAPQ12770 1279 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 MGAT5BQ3V5L5 792 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 KLHDC7AQ5VTJ3 777 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 UNC13DQ70J99 1090 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 DPP9Q86TI2 863 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 GAS2L3Q86XJ1 694 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 ZNF280BQ86YH2 543 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 FAM186BQ8IYM0 893 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTCD3-211ENST00000476215 SLC30A5Q8TAD4 765 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 SSH3Q8TE77 659 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 RIPOR3Q96MK2 946 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 PPP1R9BQ96SB3 815 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 STARD7Q9NQZ5 370 aa6.01□□□□□ -1.45
PTCD3-211ENST00000476215 PIPSLA2A3N6 862 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 hCG_1984214I3L0E3 225 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 PEX14O75381 377 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 LMNAP02545 664 aaKnown RBP6□□□□□ -1.45
PTCD3-211ENST00000476215 MT-ND5P03915 603 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 IL1R1P14778 569 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 TSHRP16473 764 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 TNFSF4P23510 183 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 LRPAP1P30533 357 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 BLOC1S1P78537 153 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 VPS53Q5VIR6 699 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 ZDHHC24Q6UX98 284 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 GJA10Q969M2 543 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 IQCDQ96DY2 449 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 OSBPL9Q96SU4 736 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 PTDSS2Q9BVG9 487 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 TPSD1Q9BZJ3 242 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 CHST8Q9H2A9 424 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 NLRC4Q9NPP4 1024 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 CASS4Q9NQ75 786 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 SERHLQ9NQF3 203 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 FNIP2Q9P278 1114 aa6□□□□□ -1.45
PTCD3-211ENST00000476215 MRPS17Q9Y2R5 130 aaKnown RBP6□□□□□ -1.45
PTCD3-211ENST00000476215 RAB27BO00194 218 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 APOL1O14791 398 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 THAP12O43422 761 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 NCK2O43639 380 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 ANXA2P07355 339 aaKnown RBP5.99□□□□□ -1.45
PTCD3-211ENST00000476215 TXNP10599 105 aaKnown RBP5.99□□□□□ -1.45
PTCD3-211ENST00000476215 EGR2P11161 476 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-211ENST00000476215 PPP3CBP16298 524 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 HTRA4P83105 476 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-211ENST00000476215 SF3B3Q15393 1217 aaKnown RBP5.99□□□□□ -1.45
PTCD3-211ENST00000476215 FAM209BQ5JX69 171 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 ARHGAP40Q5TG30 622 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 HECTD2Q5U5R9 776 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms