RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MAGED2Q9UNF1 606 aaPredicted RBP19.91■□□□□ 0.78
CCDC171-206ENST00000474193 TRAF3IP3Q9Y228 551 aa19.91■□□□□ 0.78
CCDC171-206ENST00000474193 TSC2P49815 1807 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 HEPACAM2A8MVW5 462 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 MAN2B1O00754 1011 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 PDGFRBP09619 1106 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 P4HA1P13674 534 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 ATF6P18850 670 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 LRRC63Q05C16 580 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 GRM2Q14416 872 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 UBXN2BQ14CS0 331 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 CFAP221Q4G0U5 840 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 ZNF852Q6ZMS4 543 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 GAREM2Q75VX8 874 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 ALYREFQ86V81 257 aaKnown RBP19.9■□□□□ 0.78
CCDC171-206ENST00000474193 ARID3BQ8IVW6 561 aaPredicted RBP19.9■□□□□ 0.78
CCDC171-206ENST00000474193 MRPS31Q92665 395 aaKnown RBP19.9■□□□□ 0.78
CCDC171-206ENST00000474193 BCO2Q9BYV7 579 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 OSBPL6Q9BZF3 934 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 TMLHEQ9NVH6 421 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 EHD2Q9NZN4 543 aa19.9■□□□□ 0.78
CCDC171-206ENST00000474193 NXF1Q9UBU9 619 aaKnown RBP19.9■□□□□ 0.78
CCDC171-206ENST00000474193 PPP1R3GB7ZBB8 358 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 TACC1O75410 805 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 STAU1O95793 577 aaKnown RBP19.89■□□□□ 0.77
CCDC171-206ENST00000474193 KRT13P13646 458 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 TRIM21P19474 475 aaKnown RBP19.89■□□□□ 0.77
CCDC171-206ENST00000474193 BMP6P22004 513 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 FCARP24071 287 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 CCNE1P24864 410 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 CYP2F1P24903 491 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 DDX6P26196 483 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCDC171-206ENST00000474193 ANXA13P27216 316 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 HOXD11P31277 338 aaPredicted RBP19.89■□□□□ 0.77
CCDC171-206ENST00000474193 VIPR2P41587 438 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 PAK1Q13153 545 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 EDRF1Q3B7T1 1238 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 ZNF667Q5HYK9 610 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 VITQ6UXI7 678 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 TPRG1Q6ZUI0 275 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 OSTM1Q86WC4 334 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 SCN4BQ8IWT1 228 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 PJA1Q8NG27 643 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 TMC2Q8TDI7 906 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 NELFBQ8WX92 580 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 ZNF334Q9HCZ1 680 aaPredicted RBP19.89■□□□□ 0.77
CCDC171-206ENST00000474193 TRPV5Q9NQA5 729 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 ANO10Q9NW15 660 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 THG1LQ9NWX6 298 aaKnown RBP19.89■□□□□ 0.77
CCDC171-206ENST00000474193 CTNND2Q9UQB3 1225 aa19.89■□□□□ 0.77
CCDC171-206ENST00000474193 FAM170BA6NMN3 283 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 SOBPA7XYQ1 873 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 IKBKBO14920 756 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 CETN3O15182 167 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 NR2F2P24468 414 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 AVPR1AP37288 418 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 MAGEA9P43362 315 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 MAGEA11P43364 429 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 MRE11P49959 708 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 MYL6P60660 151 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 CYP27A1Q02318 531 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 ADAM9Q13443 819 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 STX1AQ16623 288 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 DDR2Q16832 855 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 SGSM1Q2NKQ1 1148 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 ZNF699Q32M78 642 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 FAM171BQ6P995 826 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 VSTM1Q6UX27 236 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 LIMS2Q7Z4I7 341 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 ZNF516Q92618 1163 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 OBP2AQ9NY56 170 aa19.88■□□□□ 0.77
CCDC171-206ENST00000474193 MYBPHLA2RUH7 354 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 A8MXQ7 604 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 MAPK13O15264 365 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 CHADO15335 359 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 DCNP07585 359 aaKnown RBP19.87■□□□□ 0.77
CCDC171-206ENST00000474193 GLULP15104 373 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 CD44P16070 742 aaKnown RBP19.87■□□□□ 0.77
CCDC171-206ENST00000474193 LMO2P25791 158 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 WEE1P30291 646 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 GRIK1P39086 918 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 CASP4P49662 377 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 FKBP3Q00688 224 aaKnown RBP19.87■□□□□ 0.77
CCDC171-206ENST00000474193 NCOA4Q13772 614 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 ANGPT1Q15389 498 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 NFIL3Q16649 462 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 TPD52L1Q16890 204 aaPredicted RBP19.87■□□□□ 0.77
CCDC171-206ENST00000474193 ARHGAP29Q52LW3 1261 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 CT47A1Q5JQC4 288 aaPredicted RBP19.87■□□□□ 0.77
CCDC171-206ENST00000474193 SCARA3Q6AZY7 606 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 C1orf228Q6PIY5 440 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 MYCBPAPQ8TBZ2 947 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 KBTBD7Q8WVZ9 684 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 CEP295NLQ96MC4 621 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 IMPG2Q9BZV3 1241 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 FOXQ1Q9C009 403 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 DNAI2Q9GZS0 605 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 HEBP1Q9NRV9 189 aa19.87■□□□□ 0.77
CCDC171-206ENST00000474193 LRRIQ3A6PVS8 624 aaPredicted RBP19.86■□□□□ 0.77
CCDC171-206ENST00000474193 FGFR1OPO95684 399 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms