RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RBM15Q96T37 977 aaKnown RBP eCLIP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 DPYSL5Q9BPU6 564 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 KATNAL1Q9BW62 490 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 MRIQ9BWK5 157 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 UNC45AQ9H3U1 944 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 AS3MTQ9HBK9 375 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 ZBTB26Q9HCK0 441 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 HELLSQ9NRZ9 838 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 GJB4Q9NTQ9 266 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 TERF2IPQ9NYB0 399 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 PDP2Q9P2J9 529 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 HECAQ9UBI9 543 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 GRHPRQ9UBQ7 328 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 CAPN11Q9UMQ6 739 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 SLC45A2Q9UMX9 530 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 PNPLA7Q6ZV29 1317 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 A0A1B0GTL3 188 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 TMEM233B4DJY2 109 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 PRRT4C9JH25 899 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 DIRC3C9JPN6 131 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 MATN2O00339 956 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 TRIM38O00635 465 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 B4GALT3O60512 393 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 HLA-DOAP06340 250 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SPATA31D3P0C874 917 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 XBP1P17861 261 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 MAN1A1P33908 653 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 MAGEA10P43363 369 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 PTDSS1P48651 473 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 PXNP49023 591 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 ALDH18A1P54886 795 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SLURP1P55000 103 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 DDX10Q13206 875 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 POSTNQ15063 836 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 ELAVL1Q15717 326 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SLC5A9Q2M3M2 681 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 TRIM71Q2Q1W2 868 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SLC4A8Q2Y0W8 1093 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 CACHD1Q5VU97 1274 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SLFN13Q68D06 897 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 PLAG1Q6DJT9 500 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 FOXR2Q6PJQ5 311 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SPATA31D4Q6ZUB0 917 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 GPRIN1Q7Z2K8 1008 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 PCGF5Q86SE9 256 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 GPR135Q8IZ08 494 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 RNF169Q8NCN4 708 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 IL17REQ8NFR9 667 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 IPO4Q8TEX9 1081 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 C18orf8Q96DM3 657 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 UBXN10Q96LJ8 280 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 TRIB1Q96RU8 372 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 MESP1Q9BRJ9 268 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 LSM14BQ9BX40 385 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SORBS1Q9BX66 1292 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 RNPEPQ9H4A4 650 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SEPSECSQ9HD40 501 aaKnown RBP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 SAGE1Q9NXZ1 904 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 KIF17Q9P2E2 1029 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 GJD2Q9UKL4 321 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 CDYLQ9Y232 598 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.93□□□□□ -1.62
BRCA1-212ENST00000473961 RAD54BQ9Y620 910 aa4.93□□□□□ -1.62
BRCA1-212ENST00000473961 CCDC195A0A1B0GUA6 201 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 AQP12BA6NM10 295 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 DRGXA6NNA5 263 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 PIP5K1BO14986 540 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 CYP27B1O15528 508 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 RGS10O43665 173 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 PIAS2O75928 621 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 STC2O76061 302 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 VEGFAP15692 232 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-212ENST00000473961 NPPBP16860 134 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 ITGALP20701 1170 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 GCSHP23434 173 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 SLC5A2P31639 672 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 EFR3AQ14156 821 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 FBXO47Q5MNV8 452 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 INTS11Q5TA45 600 aaKnown RBP4.92□□□□□ -1.62
BRCA1-212ENST00000473961 ATPAF1Q5TC12 328 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-212ENST00000473961 SFRP4Q6FHJ7 346 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-212ENST00000473961 TAPT1Q6NXT6 567 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 CRTC1Q6UUV9 634 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 GSPT2Q8IYD1 628 aaKnown RBP4.92□□□□□ -1.62
BRCA1-212ENST00000473961 NRSN1Q8IZ57 195 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 SPARTQ8N0X7 666 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 CFAP52Q8N1V2 620 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 MDGA1Q8NFP4 955 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 OR52N2Q8NGI0 321 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 RSC1A1Q92681 617 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 SKA1Q96BD8 255 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 MIEF2Q96C03 454 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 TMEM176AQ96HP8 235 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 PHACTR3Q96KR7 559 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 PPM1MQ96MI6 270 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 SLC46A1Q96NT5 459 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 OR14A2Q96R54 314 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 GDF15Q99988 308 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 PYM1Q9BRP8 204 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms