RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SLC4A11Q8NBS3 891 aa15.66■□□□□ 0.1
LMNA-213ENST00000473598 TMEM176AQ96HP8 235 aa15.66■□□□□ 0.1
LMNA-213ENST00000473598 TWNKQ96RR1 684 aa15.66■□□□□ 0.1
LMNA-213ENST00000473598 MRPL45Q9BRJ2 306 aaKnown RBP15.66■□□□□ 0.1
LMNA-213ENST00000473598 ELOVL4Q9GZR5 314 aa15.66■□□□□ 0.1
LMNA-213ENST00000473598 PCDHB7Q9Y5E2 793 aa15.66■□□□□ 0.1
LMNA-213ENST00000473598 CAPN6Q9Y6Q1 641 aa15.66■□□□□ 0.1
LMNA-213ENST00000473598 FNDC1Q4ZHG4 1894 aaPredicted RBP15.66■□□□□ 0.1
LMNA-213ENST00000473598 CASTOR2A6NHX0 329 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 A6NNZ2 444 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 NDST1P52848 882 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 SLC8A3P57103 927 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 CLEC16AQ2KHT3 1053 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 TUBB8Q3ZCM7 444 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 LIMS2Q7Z4I7 341 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 CCDC50Q8IVM0 306 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 CCDC26Q8TAB7 109 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 DDX27Q96GQ7 796 aaKnown RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.65■□□□□ 0.15e-7■■□□□ 13.2
LMNA-213ENST00000473598 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 BTNL10A8MVZ5 291 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 KIAA0754O94854 1291 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 SYF2O95926 243 aaKnown RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 FTLP02792 175 aaPredicted RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 CYP1A1P04798 512 aaPredicted RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 CFHP08603 1231 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 NEFHP12036 1026 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 UNGP13051 313 aaPredicted RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 NOMO2Q5JPE7 1267 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 C9orf50Q5SZB4 431 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 WDR93Q6P2C0 686 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 TRIM72Q6ZMU5 477 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 DPH6Q7L8W6 267 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 YTHDF3Q7Z739 585 aaKnown RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 CRIPAKQ8N1N5 446 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 RNF10Q8N5U6 811 aaKnown RBP15.65■□□□□ 0.1
LMNA-213ENST00000473598 APPL2Q8NEU8 664 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 URGCPQ8TCY9 931 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 TFAP2BQ92481 460 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 UROC1Q96N76 676 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 ZSWIM1Q9BR11 485 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 PAAF1Q9BRP4 392 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 NT5C1AQ9BXI3 368 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 IL23AQ9NPF7 189 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 KANSL3Q9P2N6 904 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 SALL4Q9UJQ4 1053 aa15.65■□□□□ 0.1
LMNA-213ENST00000473598 ANKRD62A6NC57 917 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 HUS1O60921 280 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 SRGAP2O75044 1071 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 MOCS3O95396 460 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 TMEM253P0C7T8 217 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 IGFBP6P24592 240 aaPredicted RBP15.64■□□□□ 0.09
LMNA-213ENST00000473598 IRAK1P51617 712 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 ORC1Q13415 861 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 PPIGQ13427 754 aaKnown RBP eCLIP15.64■□□□□ 0.091e-8■■■□□ 15.5
LMNA-213ENST00000473598 ACAD10Q6JQN1 1059 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 CNKSR3Q6P9H4 555 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 ZNF365Q70YC5 407 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 OTOP2Q7RTS6 562 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 UNC93AQ86WB7 457 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 TOP6BLQ8N6T0 577 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 C3orf58Q8NDZ4 430 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 PAIP2Q9BPZ3 127 aaKnown RBP15.64■□□□□ 0.09
LMNA-213ENST00000473598 UBE2OQ9C0C9 1292 aaKnown RBP15.64■□□□□ 0.09
LMNA-213ENST00000473598 CD248Q9HCU0 757 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 LRFN2Q9ULH4 789 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 PCDHGC3Q9UN70 934 aa15.64■□□□□ 0.09
LMNA-213ENST00000473598 CD19P15391 556 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 ABCB4P21439 1286 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 MCM3P25205 808 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
LMNA-213ENST00000473598 CCNHP51946 323 aaPredicted RBP15.63■□□□□ 0.09
LMNA-213ENST00000473598 CLNS1AP54105 237 aaKnown RBP15.63■□□□□ 0.09
LMNA-213ENST00000473598 TMEM240Q5SV17 173 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 FAM76AQ8TAV0 307 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 KBTBD7Q8WVZ9 684 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 CTNNBL1Q8WYA6 563 aaPredicted RBP15.63■□□□□ 0.09
LMNA-213ENST00000473598 CYFIP2Q96F07 1278 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 ALS2CR12Q96Q35 445 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 TBC1D13Q9NVG8 400 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 NME7Q9Y5B8 376 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 TSC2P49815 1807 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 SZT2Q5T011 3432 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 A0A0A6YYK5 440 aaPredicted RBP15.63■□□□□ 0.09
LMNA-213ENST00000473598 FAM170AA1A519 330 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 CYB561D2O14569 222 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 MED7O43513 233 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 FAM163BP0C2L3 166 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 VDRP11473 427 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 PRLRP16471 622 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 CENPCQ03188 943 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 DSC1Q08554 894 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 IKBKEQ14164 716 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 RBBP5Q15291 538 aaKnown RBP15.63■□□□□ 0.09
LMNA-213ENST00000473598 PASD1Q8IV76 773 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 ABI1Q8IZP0 508 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 OR6B3Q8NGW1 331 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 SENP8Q96LD8 212 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 HEXIM2Q96MH2 286 aaKnown RBP15.63■□□□□ 0.09
LMNA-213ENST00000473598 THAP2Q9H0W7 228 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms