RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 C2orf15Q8WU43 125 aaKnown RBP10.3□□□□□ -0.76
DUBR-203ENST00000473550 ELMO3Q96BJ8 720 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 CYFIP2Q96F07 1278 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 IGSF21Q96ID5 467 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 PPP1R13BQ96KQ4 1090 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 TWNKQ96RR1 684 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 HNRNPABQ99729 332 aaKnown RBP10.3□□□□□ -0.76
DUBR-203ENST00000473550 SYT15Q9BQS2 421 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 DESI2Q9BSY9 194 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 UBXN6Q9BZV1 441 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 MRPL47Q9HD33 250 aaKnown RBP10.3□□□□□ -0.76
DUBR-203ENST00000473550 AVENQ9NQS1 362 aaPredicted RBP10.3□□□□□ -0.76
DUBR-203ENST00000473550 SPG21Q9NZD8 308 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 UVRAGQ9P2Y5 699 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 GTF3C4Q9UKN8 822 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 SCINQ9Y6U3 715 aa10.3□□□□□ -0.76
DUBR-203ENST00000473550 ZNF263O14978 683 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 PDGFRBP09619 1106 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 SYN1P17600 705 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 BRD2P25440 801 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 ACADSBP45954 432 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 GATMP50440 423 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 GALCP54803 685 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 HADHBP55084 474 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 BST2Q10589 180 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 MRPL58Q14197 206 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 PTPN14Q15678 1187 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 C6orf132Q5T0Z8 1188 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 FAM171A1Q5VUB5 890 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 ERICH1Q86X53 443 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 ZDHHC17Q8IUH5 632 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 SLC39A11Q8N1S5 342 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 COLGALT1Q8NBJ5 622 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 IPO4Q8TEX9 1081 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.76
DUBR-203ENST00000473550 CLP1Q92989 425 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
DUBR-203ENST00000473550 HSFY1Q96LI6 401 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 CEP295NLQ96MC4 621 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 SAMD11Q96NU1 681 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 ALS2CR12Q96Q35 445 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 TTPALQ9BTX7 342 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 PLVAPQ9BX97 442 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.29□□□□□ -0.76
DUBR-203ENST00000473550 MARCH5Q9NX47 278 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 ADAM22Q9P0K1 906 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 TSPAN16Q9UKR8 245 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 ZMYND8Q9ULU4 1186 aaPredicted RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 MAFFQ9ULX9 164 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 REXO2Q9Y3B8 237 aaKnown RBP10.29□□□□□ -0.76
DUBR-203ENST00000473550 BACE2Q9Y5Z0 518 aa10.29□□□□□ -0.76
DUBR-203ENST00000473550 TSC2P49815 1807 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 M0QYV0 167 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 TLL1O43897 1013 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 B4GALT3O60512 393 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 MICAL2O94851 1124 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 EFEMP2O95967 443 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 SOD2P04179 222 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 RB1P06400 928 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 MMP8P22894 467 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 LMO2P25791 158 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 GPD2P43304 727 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 GSCP56915 257 aaPredicted RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 VARS2Q5ST30 1063 aaKnown RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 PPP1R26Q5T8A7 1209 aaPredicted RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 NAA35Q5VZE5 725 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 KIAA1841Q6NSI8 718 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 FAM171BQ6P995 826 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 DDX53Q86TM3 631 aaKnown RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 OSTM1Q86WC4 334 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 RNF168Q8IYW5 571 aaPredicted RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 MCOLN2Q8IZK6 566 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 SYCE1Q8N0S2 351 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 C1orf131Q8NDD1 294 aaKnown RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 TRIM58Q8NG06 486 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 OLIG1Q8TAK6 271 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 HASPINQ8TF76 798 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 PIK3R5Q8WYR1 880 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 RFFLQ8WZ73 363 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 TFAP2BQ92481 460 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 SECISBP2LQ93073 1101 aaKnown RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 SMARCD1Q96GM5 515 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 PCDHB18PQ96TA0 734 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 HERC2P3Q9BVR0 1158 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 DUSP16Q9BY84 665 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 ABCB6Q9NP58 842 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 PNPLA8Q9NP80 782 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 ACP6Q9NPH0 428 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 CHST7Q9NS84 486 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 PARVAQ9NVD7 372 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 TRMT1Q9NXH9 659 aaKnown RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 HSFX1Q9UBD0 423 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 HMGXB4Q9UGU5 601 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 LZTS1Q9Y250 596 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 MRPL42Q9Y6G3 142 aaKnown RBP10.28□□□□□ -0.76
DUBR-203ENST00000473550 NCANO14594 1321 aa10.28□□□□□ -0.76
DUBR-203ENST00000473550 XPO1O14980 1071 aaKnown RBP10.27□□□□□ -0.77
DUBR-203ENST00000473550 SART1O43290 800 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms