RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 KIAA1257Q9ULG3 409 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 PCDHB4Q9Y5E5 795 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 EYSQ5T1H1 3165 aa20.19■□□□□ 0.82
CTDSP1-207ENST00000473420 PATJQ8NI35 1801 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 MYH10P35580 1976 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 A0A1W2PQC6 194 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 H3BQ06 376 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 TEX33O43247 280 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 XYLBO75191 536 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 UCHL3P15374 230 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 ALDH1A3P47895 512 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 ZNF132P52740 706 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 ORC1Q13415 861 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 SMAD4Q13485 552 aaKnown RBP20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 NR1I3Q14994 352 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 AAK1Q2M2I8 961 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 PUS10Q3MIT2 529 aaKnown RBP20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 MGAT5BQ3V5L5 792 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 ZNF394Q53GI3 561 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 CES5AQ6NT32 575 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 TMEM270Q6UE05 265 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 GPR149Q86SP6 731 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 TTC9BQ8N6N2 239 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 C12orf76Q8N812 135 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 ZNF707Q96C28 371 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 CEP295NLQ96MC4 621 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 NAP1L5Q96NT1 182 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 LPIN3Q9BQK8 851 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 NAA15Q9BXJ9 866 aaKnown RBP20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 B3GNT5Q9BYG0 378 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 GANQ9H2C0 597 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 SLC27A5Q9Y2P5 690 aa20.18■□□□□ 0.82
CTDSP1-207ENST00000473420 GREB1Q4ZG55 1949 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 CYP2F1P24903 491 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 UBASH3AP57075 661 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 RPL10AP62906 217 aaKnown RBP20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 TWF1Q12792 350 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 IQCEQ6IPM2 695 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 TMC5Q6UXY8 1006 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 FAM35AQ86V20 835 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 ELMOD1Q8N336 334 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 RBBP8NLQ8NC74 664 aaPredicted RBP20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 NEK11Q8NG66 645 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 HEXIM2Q96MH2 286 aaKnown RBP20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 SEPT5Q99719 369 aaPredicted RBP20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 HNRNPABQ99729 332 aaKnown RBP20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 PRDM6Q9NQX0 595 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 ASB3Q9Y575 518 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 FHOD1Q9Y613 1164 aa20.17■□□□□ 0.82
CTDSP1-207ENST00000473420 TRIM66O15016 1216 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 MBTPS2O43462 519 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 NOL4O94818 638 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 VDRP11473 427 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 BDNFP23560 247 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 MTHFRP42898 656 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 KLK7P49862 253 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 EPHB3P54753 998 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 ARHGAP44Q17R89 818 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 SGO2Q562F6 1265 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 ARHGAP17Q68EM7 881 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 PAQR9Q6ZVX9 377 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 FUKQ8N0W3 1084 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 C12orf29Q8N999 325 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 SLC2A14Q8TDB8 520 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 SUSD6Q92537 303 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 SMG7Q92540 1137 aaKnown RBP20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 CYFIP2Q96F07 1278 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 SMARCD1Q96GM5 515 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 PCMTD1Q96MG8 357 aaPredicted RBP20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 RIPOR3Q96MK2 946 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 NECTIN4Q96NY8 510 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 MED10Q9BTT4 135 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 ZNF518BQ9C0D4 1074 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 FAM207AQ9NSI2 230 aaPredicted RBP20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 FAM49BQ9NUQ9 324 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 CEP72Q9P209 647 aa20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 AJAP1Q9UKB5 411 aaPredicted RBP20.16■□□□□ 0.82
CTDSP1-207ENST00000473420 CCL16O15467 120 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 TPM3P06753 285 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 CCDC130P13994 396 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 ATF6P18850 670 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 VEPH1Q14D04 833 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 CLUL1Q15846 466 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 ATAT1Q5SQI0 421 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 PPP1R26Q5T8A7 1209 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 ITIH5Q86UX2 942 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 ATXN2LQ8WWM7 1075 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 C8orf48Q96LL4 319 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 APOL5Q9BWW9 433 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 STK33Q9BYT3 514 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 FAM50BQ9Y247 325 aa20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 USP15Q9Y4E8 981 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-207ENST00000473420 GRXCR2A6NFK2 248 aa20.14■□□□□ 0.81
CTDSP1-207ENST00000473420 RNF225M0QZC1 329 aaPredicted RBP20.14■□□□□ 0.81
CTDSP1-207ENST00000473420 CLDN5O00501 218 aa20.14■□□□□ 0.81
CTDSP1-207ENST00000473420 CBFA2T2O43439 604 aa20.14■□□□□ 0.81
CTDSP1-207ENST00000473420 KRT5P13647 590 aa20.14■□□□□ 0.81
CTDSP1-207ENST00000473420 TFF2Q03403 129 aa20.14■□□□□ 0.81
CTDSP1-207ENST00000473420 RAPGEF1Q13905 1077 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms