RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 ARHGAP29Q52LW3 1261 aa22.23■■□□□ 1.15
EPHB3-202ENST00000473079 C1orf228Q6PIY5 440 aa22.23■■□□□ 1.15
EPHB3-202ENST00000473079 C4orf50Q6ZRC1 276 aa22.23■■□□□ 1.15
EPHB3-202ENST00000473079 MAML2Q8IZL2 1156 aaPredicted RBP22.23■■□□□ 1.15
EPHB3-202ENST00000473079 CMTM8Q8IZV2 173 aa22.23■■□□□ 1.15
EPHB3-202ENST00000473079 UXTQ9UBK9 157 aaPredicted RBP22.23■■□□□ 1.15
EPHB3-202ENST00000473079 FBXO4Q9UKT5 387 aa22.23■■□□□ 1.15
EPHB3-202ENST00000473079 PIAS3Q9Y6X2 628 aa22.23■■□□□ 1.15
EPHB3-202ENST00000473079 HCRTO43612 131 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 ATP2C2O75185 946 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 NOL4O94818 638 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 GPR15P49685 360 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 ZNF528Q3MIS6 628 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 MAMSTRQ6ZN01 415 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 CELF5Q8N6W0 485 aaKnown RBP22.22■■□□□ 1.15
EPHB3-202ENST00000473079 CSGALNACT1Q8TDX6 532 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 PARD3BQ8TEW8 1205 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 FAM3CQ92520 227 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 CEP295NLQ96MC4 621 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 MMS19Q96T76 1030 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 SYT15Q9BQS2 421 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 C8orf33Q9H7E9 229 aaPredicted RBP22.22■■□□□ 1.15
EPHB3-202ENST00000473079 SPATA6Q9NWH7 488 aaPredicted RBP22.22■■□□□ 1.15
EPHB3-202ENST00000473079 COL4A2P08572 1712 aa22.22■■□□□ 1.15
EPHB3-202ENST00000473079 PRAMEF12O95522 483 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 PLCB2Q00722 1185 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 TRPC3Q13507 836 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 WDR72Q3MJ13 1102 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 VSTM1Q6UX27 236 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 MON1AQ86VX9 555 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 GPIHBP1Q8IV16 184 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 PLEKHO2Q8TD55 490 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 BPIFB1Q8TDL5 484 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 IER2Q9BTL4 223 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 XYLT2Q9H1B5 865 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 VRTNQ9H8Y1 702 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 CRTAC1Q9NQ79 661 aa22.21■■□□□ 1.15
EPHB3-202ENST00000473079 MAGEC2Q9UBF1 373 aaPredicted RBP22.21■■□□□ 1.15
EPHB3-202ENST00000473079 SLC38A8A6NNN8 435 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 LAMTOR5O43504 91 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 RHOBTB3O94955 611 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 KIF20AO95235 890 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 RPN1P04843 607 aaKnown RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 GNL1P36915 607 aaPredicted RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 CCDC142Q17RM4 750 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 MYCBPAPQ8TBZ2 947 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 MRPS31Q92665 395 aaKnown RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 CCDC47Q96A33 483 aaKnown RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 SYAP1Q96A49 352 aaPredicted RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 SPATA17Q96L03 361 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 MRPL45Q9BRJ2 306 aaKnown RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 THG1LQ9NWX6 298 aaKnown RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 MAGED2Q9UNF1 606 aaPredicted RBP22.2■■□□□ 1.14
EPHB3-202ENST00000473079 TRAF3IP3Q9Y228 551 aa22.2■■□□□ 1.14
EPHB3-202ENST00000473079 PDGFRBP09619 1106 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 MYL6P60660 151 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 PSMC1P62191 440 aaKnown RBP22.19■■□□□ 1.14
EPHB3-202ENST00000473079 TNNC1P63316 161 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 DPYDQ12882 1025 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 SDHAF4Q5VUM1 108 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 ZC3H14Q6PJT7 736 aaKnown RBP22.19■■□□□ 1.14
EPHB3-202ENST00000473079 KRBA2Q6ZNG9 492 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 MAB21L3Q8N8X9 362 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 CHRDQ9H2X0 955 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 SNX25Q9H3E2 840 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 MIA3Q5JRA6 1907 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 DMDP11532 3685 aa22.19■■□□□ 1.14
EPHB3-202ENST00000473079 NUP210Q8TEM1 1887 aaPredicted RBP22.18■■□□□ 1.14
EPHB3-202ENST00000473079 LRRIQ3A6PVS8 624 aaPredicted RBP22.18■■□□□ 1.14
EPHB3-202ENST00000473079 PHACTR2O75167 634 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 C4BPAP04003 597 aaKnown RBP22.18■■□□□ 1.14
EPHB3-202ENST00000473079 NR3C1P04150 777 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 CCNE1P24864 410 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 AVPR1AP37288 418 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 CASP4P49662 377 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 ZNF268Q14587 947 aaPredicted RBP22.18■■□□□ 1.14
EPHB3-202ENST00000473079 TXNDC8Q6A555 127 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 RALGPS2Q86X27 583 aaPredicted RBP22.18■■□□□ 1.14
EPHB3-202ENST00000473079 SCN4BQ8IWT1 228 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 FSIP1Q8NA03 581 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 TMC2Q8TDI7 906 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 USP13Q92995 863 aaPredicted RBP22.18■■□□□ 1.14
EPHB3-202ENST00000473079 MYLPFQ96A32 169 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 PCED1BQ96HM7 432 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 KIF9Q9HAQ2 790 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 TDP1Q9NUW8 608 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 NDRG2Q9UN36 371 aaKnown RBP22.18■■□□□ 1.14
EPHB3-202ENST00000473079 NME7Q9Y5B8 376 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 VPS13AQ96RL7 3174 aa22.18■■□□□ 1.14
EPHB3-202ENST00000473079 MAPK13O15264 365 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 CHRNB1P11230 501 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 KPNA1P52294 538 aaPredicted RBP22.17■■□□□ 1.14
EPHB3-202ENST00000473079 BECN1Q14457 450 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 NFIL3Q16649 462 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 TDRD10Q5VZ19 366 aaKnown RBP22.17■■□□□ 1.14
EPHB3-202ENST00000473079 STKLD1Q8NE28 680 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 OR6B3Q8NGW1 331 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 NELL1Q92832 810 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 ZFYVE19Q96K21 471 aa22.17■■□□□ 1.14
EPHB3-202ENST00000473079 SMG9Q9H0W8 520 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms