RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SPECC1L-ADORA2AF8WAN1 911 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 CLIC2O15247 247 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 HCRTO43612 131 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 NOL4O94818 638 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 CST3P01034 146 aaPredicted RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 LMO2P25791 158 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 CTHP32929 405 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 SOX9P48436 509 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 CUL4BQ13620 913 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 PSMD6Q15008 389 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 SDHAF4Q5VUM1 108 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 TXNDC8Q6A555 127 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 MON1AQ86VX9 555 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 SPATA2LQ8IUW3 424 aaPredicted RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 NELFCDQ8IXH7 590 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 C12orf56Q8IXR9 622 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 MAB21L3Q8N8X9 362 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 RDH13Q8NBN7 331 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 KBTBD7Q8WVZ9 684 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 RUBCNQ92622 972 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 USP13Q92995 863 aaPredicted RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 TRMT2BQ96GJ1 504 aaKnown RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 FAM83CQ9BQN1 747 aa16.39■□□□□ 0.21
VTI1A-203ENST00000472892 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 UXTQ9UBK9 157 aaPredicted RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
VTI1A-203ENST00000472892 EP300Q09472 2414 aaPredicted RBP16.38■□□□□ 0.21
VTI1A-203ENST00000472892 ATP2C2O75185 946 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 FAM163BP0C2L3 166 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 TNNI1P19237 187 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 WARSP23381 471 aaKnown RBP16.38■□□□□ 0.21
VTI1A-203ENST00000472892 AVPR1AP37288 418 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 MAGEA11P43364 429 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 AFMP43652 599 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 TNK2Q07912 1038 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 CYP24A1Q07973 514 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 GAS6Q14393 721 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 CCDC142Q17RM4 750 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 WDR44Q5JSH3 913 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 TXNDC11Q6PKC3 985 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 HS2ST1Q7LGA3 356 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 STKLD1Q8NE28 680 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 TTC8Q8TAM2 541 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 MRPS31Q92665 395 aaKnown RBP16.38■□□□□ 0.21
VTI1A-203ENST00000472892 CGRRF1Q99675 332 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 SLC39A2Q9NP94 309 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 TDP1Q9NUW8 608 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 CDH9Q9ULB4 789 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 CCL26Q9Y258 94 aa16.38■□□□□ 0.21
VTI1A-203ENST00000472892 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-203ENST00000472892 SLFN14P0C7P3 912 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 DLATP10515 647 aaKnown RBP16.37■□□□□ 0.21
VTI1A-203ENST00000472892 CXCL12P48061 93 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 CYP2J2P51589 502 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 CCR3P51677 355 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 NRLP54845 237 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 LRRC32Q14392 662 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 ZNF268Q14587 947 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-203ENST00000472892 PPP2R5DQ14738 602 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 KNOP1Q1ED39 458 aaKnown RBP16.37■□□□□ 0.21
VTI1A-203ENST00000472892 ITPRIPL2Q3MIP1 535 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 DGKKQ5KSL6 1271 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 C4orf50Q6ZRC1 276 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 SPEM1Q8N4L4 309 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 SPRYD3Q8NCJ5 442 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 ZNF516Q92618 1163 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 CCDC127Q96BQ5 260 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 FNBP1Q96RU3 617 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 SYT15Q9BQS2 421 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 GZF1Q9H116 711 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-203ENST00000472892 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 KIF9Q9HAQ2 790 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 CRTAC1Q9NQ79 661 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 GKN1Q9NS71 199 aa16.37■□□□□ 0.21
VTI1A-203ENST00000472892 MAGEC2Q9UBF1 373 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-203ENST00000472892 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-203ENST00000472892 KLRC4O43908 158 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 TACC1O75410 805 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 TADA3O75528 432 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 GNL1P36915 607 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-203ENST00000472892 MAPRE1Q15691 268 aaKnown RBP16.36■□□□□ 0.21
VTI1A-203ENST00000472892 VSTM1Q6UX27 236 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 GRAMD1CQ8IYS0 662 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 CEP57L1Q8IYX8 460 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 SYNPOQ8N3V7 929 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 DCLK2Q8N568 766 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 PAGE5Q96GU1 130 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 SPATA17Q96L03 361 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 CEP295NLQ96MC4 621 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 RBM12Q9NTZ6 932 aaKnown RBP16.36■□□□□ 0.21
VTI1A-203ENST00000472892 SERTAD1Q9UHV2 236 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 SPTBN4Q9H254 2564 aa16.36■□□□□ 0.21
VTI1A-203ENST00000472892 OTOGLQ3ZCN5 2332 aa16.35■□□□□ 0.21
VTI1A-203ENST00000472892 ACTN4O43707 911 aaKnown RBP16.35■□□□□ 0.21
VTI1A-203ENST00000472892 PAPSS2O95340 614 aaPredicted RBP16.35■□□□□ 0.21
VTI1A-203ENST00000472892 STAU1O95793 577 aaKnown RBP16.35■□□□□ 0.21
VTI1A-203ENST00000472892 PDGFRBP09619 1106 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms