RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 TNFAIP2Q03169 654 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ITKQ08881 620 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 HYAL1Q12794 435 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 GPM6BQ13491 265 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 WDR43Q15061 677 aaKnown RBP eCLIP7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ZXDCQ2QGD7 858 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-205ENST00000472318 CERKLQ49MI3 558 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-205ENST00000472318 IL31Q6EBC2 164 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 USP53Q70EK8 1073 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ZBTB46Q86UZ6 589 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ZNF354CQ86Y25 554 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 REPS2Q8NFH8 660 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 PIP4K2CQ8TBX8 421 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ZCCHC14Q8WYQ9 949 aaKnown RBP7.83□□□□□ -1.16
SCAF4-205ENST00000472318 CHMP4CQ96CF2 233 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 MBD6Q96DN6 1003 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 SAMD11Q96NU1 681 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 SSBP3Q9BWW4 388 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-205ENST00000472318 SEZ6LQ9BYH1 1024 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ABHD16BQ9H3Z7 469 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 FBXO28Q9NVF7 368 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 PUF60Q9UHX1 559 aaKnown RBP7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ADAMTS5Q9UNA0 930 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 MYH13Q9UKX3 1938 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 ZFYVE26Q68DK2 2539 aa7.83□□□□□ -1.16
SCAF4-205ENST00000472318 FAM208BQ5VWN6 2430 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 H3BNC9 293 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 SUPT20HL2P0C7V6 817 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 VDRP11473 427 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 SHMT1P34896 483 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 HTR3AP46098 478 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 MLLT6P55198 1093 aaPredicted RBP7.82□□□□□ -1.16
SCAF4-205ENST00000472318 SIM2Q14190 667 aaPredicted RBP7.82□□□□□ -1.16
SCAF4-205ENST00000472318 SCN5AQ14524 2016 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 NTRK3Q16288 839 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 ZC3H12BQ5HYM0 836 aaKnown RBP7.82□□□□□ -1.16
SCAF4-205ENST00000472318 PKN3Q6P5Z2 889 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 ARMCX2Q7L311 632 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 TLK2Q86UE8 772 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 TRIM48Q8IWZ4 208 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 DCAF4Q8WV16 495 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 OSBP2Q969R2 916 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 MTMR8Q96EF0 704 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 MSLNLQ96KJ4 702 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 ZFYVE21Q9BQ24 234 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 SELENOOQ9BVL4 669 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 JAM3Q9BX67 310 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 RSPH9Q9H1X1 276 aaPredicted RBP7.82□□□□□ -1.16
SCAF4-205ENST00000472318 LUZP4Q9P127 313 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 CD207Q9UJ71 328 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 MYRFQ9Y2G1 1151 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 RIPK3Q9Y572 518 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 DDX49Q9Y6V7 483 aaKnown RBP7.82□□□□□ -1.16
SCAF4-205ENST00000472318 FLNBO75369 2602 aaKnown RBP7.82□□□□□ -1.16
SCAF4-205ENST00000472318 UNC79Q9P2D8 2635 aa7.82□□□□□ -1.16
SCAF4-205ENST00000472318 FRYQ5TBA9 3013 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 DYTNA2CJ06 578 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 GSG1L2A8MUP6 293 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 VWA5AO00534 786 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 RFPL1O75677 317 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 EYA4O95677 639 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 GRK2P25098 689 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 GRK3P35626 688 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 NEK3P51956 506 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 DYNLL1P63167 89 aaKnown RBP7.81□□□□□ -1.16
SCAF4-205ENST00000472318 MTMR1Q13613 665 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 PTPN21Q16825 1174 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 LONRF2Q1L5Z9 754 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 KIZQ2M2Z5 673 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 ATF7IPQ6VMQ6 1270 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 OTOP3Q7RTS5 596 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 PROSER1Q86XN7 944 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 HERPUD2Q9BSE4 406 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 C1QTNF3Q9BXJ4 246 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 L2HGDHQ9H9P8 463 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 CABP5Q9NP86 173 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 OBP2AQ9NY56 170 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 SERPINB13Q9UIV8 391 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 PTPRSQ13332 1948 aa7.81□□□□□ -1.16
SCAF4-205ENST00000472318 PRRT4C9JH25 899 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 NCK2O43639 380 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 ZEB2O60315 1214 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 CIAO1O76071 339 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 BAG3O95817 575 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 CYP1A1P04798 512 aaPredicted RBP7.8□□□□□ -1.16
SCAF4-205ENST00000472318 FAM153BP0C7A2 387 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 PABPC1P11940 636 aaKnown RBP7.8□□□□□ -1.16
SCAF4-205ENST00000472318 ICAM3P32942 547 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 PLCD1P51178 756 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
SCAF4-205ENST00000472318 TMC5Q6UXY8 1006 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.8□□□□□ -1.16
SCAF4-205ENST00000472318 DCLK2Q8N568 766 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 SPATA5Q8NB90 893 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 PJA1Q8NG27 643 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 UHMK1Q8TAS1 419 aaKnown RBP7.8□□□□□ -1.16
SCAF4-205ENST00000472318 KCNG4Q8TDN1 519 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 RPGRIP1Q96KN7 1286 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 SCLT1Q96NL6 688 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 NOL10Q9BSC4 688 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms