RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 RPL6Q02878 288 aaKnown RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 IFT88Q13099 833 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 TMED1Q13445 227 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 GIT2Q14161 759 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 CYP27C1Q4G0S4 372 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 TAF1BQ53T94 588 aaPredicted RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 CT47A1Q5JQC4 288 aaPredicted RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 WIPI1Q5MNZ9 446 aaPredicted RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 IQCEQ6IPM2 695 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 NFXL1Q6ZNB6 911 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 MTSS1LQ765P7 747 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 NOP9Q86U38 636 aaKnown RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 SLCO6A1Q86UG4 719 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 ECHDC2Q86YB7 292 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 GATAD2BQ8WXI9 593 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 ADAMTS14Q8WXS8 1223 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 PMM1Q92871 262 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 PLPPR2Q96GM1 343 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 B3GALT6Q96L58 329 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 ARPC5LQ9BPX5 153 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 PDCD2LQ9BRP1 358 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 OSBPL1AQ9BXW6 950 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 PUS7LQ9H0K6 701 aaKnown RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 GBP3Q9H0R5 595 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 RETREG1Q9H6L5 497 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 ELAC1Q9H777 363 aaKnown RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 NRDE2Q9H7Z3 1164 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 EPB41L4AQ9HCS5 686 aaPredicted RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 CHST12Q9NRB3 414 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 KBTBD4Q9NVX7 518 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 HCFC1R1Q9NWW0 138 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 CHCHD3Q9NX63 227 aaKnown RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 ARPP21Q9UBL0 812 aaPredicted RBP4.89□□□□□ -1.63
LMNB1-205ENST00000472034 DKK4Q9UBT3 224 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 FAN1Q9Y2M0 1017 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 KIF3AQ9Y496 699 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 PIAS3Q9Y6X2 628 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 CACNA1DQ01668 2161 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 NCANO14594 1321 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 WDR19Q8NEZ3 1342 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 ADAMTS9Q9P2N4 1935 aa4.89□□□□□ -1.63
LMNB1-205ENST00000472034 CCDC189A1A4V9 331 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 MEIS3P2A8K0S8 358 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 GSG1L2A8MUP6 293 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 WDR64B1ANS9 1081 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 F8W810 466 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 M0QZ92 97 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 IPO5O00410 1097 aaKnown RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 MAN2B1O00754 1011 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 DYNC1I1O14576 645 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 CCP110O43303 1012 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 TGM5O43548 720 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 TLX3O43711 291 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 KIF5CO60282 957 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 TPM3P06753 285 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 MYF5P13349 255 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 INSRRP14616 1297 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 RPL17P18621 184 aaKnown RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 FCARP24071 287 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 HOXA6P31267 233 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 ABCD1P33897 745 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 EIF4A3P38919 411 aaKnown RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 PGM5Q15124 567 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 PLCB4Q15147 1175 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 CCDC184Q52MB2 194 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 SBK1Q52WX2 424 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 LRFN4Q6PJG9 635 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 METTL7BQ6UX53 244 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 CYP26C1Q6V0L0 522 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 ZAR1Q86SH2 424 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 ZNF280BQ86YH2 543 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 GOLM1Q8NBJ4 401 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 DCAF4Q8WV16 495 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 DNASE1L2Q92874 299 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 LPPQ93052 612 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 GAL3ST3Q96A11 431 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 ISL2Q96A47 359 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 SYAP1Q96A49 352 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 MCRS1Q96EZ8 462 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 TTC14Q96N46 770 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 WNT10AQ9GZT5 417 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 BRD9Q9H8M2 597 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 TRPV5Q9NQA5 729 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 RRAGDQ9NQL2 400 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 MRPL17Q9NRX2 175 aaKnown RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 ZFP37Q9Y6Q3 630 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-205ENST00000472034 KDM3AQ9Y4C1 1321 aa4.88□□□□□ -1.63
LMNB1-205ENST00000472034 MYH7P12883 1935 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 MTCL1Q9Y4B5 1905 aaKnown RBP4.87□□□□□ -1.63
LMNB1-205ENST00000472034 SPTBN1Q01082 2364 aaKnown RBP4.87□□□□□ -1.63
LMNB1-205ENST00000472034 PI4KAP42356 2102 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 CCL16O15467 120 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 TIMM44O43615 452 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 ECI2O75521 394 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 BCAR3O75815 825 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 GOLGA8HP0CJ92 632 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 HSPD1P10809 573 aaKnown RBP4.87□□□□□ -1.63
LMNB1-205ENST00000472034 C6P13671 934 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 CD59P13987 128 aa4.87□□□□□ -1.63
LMNB1-205ENST00000472034 ENGP17813 658 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms