RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 VPS13AQ96RL7 3174 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 PATJQ8NI35 1801 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 PRAMEF12O95522 483 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 TNNC2P02585 160 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 HAPLN1P10915 354 aaPredicted RBP10.12□□□□□ -0.79
GGPS1-204ENST00000471812 GLULP15104 373 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 HMGA1P17096 107 aaKnown RBP10.12□□□□□ -0.79
GGPS1-204ENST00000471812 CD72P21854 359 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 AVPR2P30518 371 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 PRCPP42785 496 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 NUCB2P80303 420 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 PPP3CAQ08209 521 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 DDR2Q16832 855 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 DUOXA2Q1HG44 320 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 MGAT5BQ3V5L5 792 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 INTS6LQ5JSJ4 861 aaKnown RBP10.12□□□□□ -0.79
GGPS1-204ENST00000471812 CEP135Q66GS9 1140 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 ELMSAN1Q6PJG2 1045 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 VITQ6UXI7 678 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 HS2ST1Q7LGA3 356 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 UBALD2Q8IYN6 164 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 FLCNQ8NFG4 579 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 CACTINQ8WUQ7 758 aaKnown RBP10.12□□□□□ -0.79
GGPS1-204ENST00000471812 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
GGPS1-204ENST00000471812 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.12□□□□□ -0.79
GGPS1-204ENST00000471812 IGSF9Q9P2J2 1179 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 MTF2Q9Y483 593 aaPredicted RBP10.12□□□□□ -0.79
GGPS1-204ENST00000471812 PCDHA5Q9Y5H7 936 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 ATP6V1DQ9Y5K8 247 aa10.12□□□□□ -0.79
GGPS1-204ENST00000471812 MYO16Q9Y6X6 1858 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 CLDN5O00501 218 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 PDXKO00764 312 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 KIAA0391O15091 583 aaKnown RBP10.11□□□□□ -0.79
GGPS1-204ENST00000471812 SRFP11831 508 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 GABRR2P28476 465 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 HOXC13P31276 330 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 USP46P62068 366 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 PSMD2Q13200 908 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 KCNB1Q14721 858 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 WDR44Q5JSH3 913 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 PDZD4Q76G19 769 aaPredicted RBP10.11□□□□□ -0.79
GGPS1-204ENST00000471812 LAPTM4BQ86VI4 370 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 METTL23Q86XA0 190 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 SLC9A9Q8IVB4 645 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 PSMG2Q969U7 264 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 MYLPFQ96A32 169 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 KCTD12Q96CX2 325 aaKnown RBP10.11□□□□□ -0.79
GGPS1-204ENST00000471812 ZFYVE19Q96K21 471 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 ZNF512Q96ME7 567 aaPredicted RBP10.11□□□□□ -0.79
GGPS1-204ENST00000471812 ASB16Q96NS5 453 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 SLC22A12Q96S37 553 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 SYT15Q9BQS2 421 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 MMRN2Q9H8L6 949 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 APOBEC3GQ9HC16 384 aaKnown RBP10.11□□□□□ -0.79
GGPS1-204ENST00000471812 ASAH2Q9NR71 780 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 NXF1Q9UBU9 619 aaKnown RBP10.11□□□□□ -0.79
GGPS1-204ENST00000471812 MAN1B1Q9UKM7 699 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 FBXL21Q9UKT6 434 aa10.11□□□□□ -0.79
GGPS1-204ENST00000471812 ZFHX2Q9C0A1 2572 aaPredicted RBP10.11□□□□□ -0.79
GGPS1-204ENST00000471812 HUS1O60921 280 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 PRPF40AO75400 957 aaKnown RBP10.1□□□□□ -0.79
GGPS1-204ENST00000471812 HLA-DRAP01903 254 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 DCNP07585 359 aaKnown RBP10.1□□□□□ -0.79
GGPS1-204ENST00000471812 WARSP23381 471 aaKnown RBP10.1□□□□□ -0.79
GGPS1-204ENST00000471812 NR2F2P24468 414 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 PNPLA4P41247 253 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 GCLMP48507 274 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 CLDN10P78369 228 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 FAM160A1Q05DH4 1040 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 WDR72Q3MJ13 1102 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 MDH1BQ5I0G3 518 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 FAM171BQ6P995 826 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 SV2AQ7L0J3 742 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 THEM5Q8N1Q8 247 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 GUF1Q8N442 669 aaKnown RBP10.1□□□□□ -0.79
GGPS1-204ENST00000471812 TOP6BLQ8N6T0 577 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 TTC8Q8TAM2 541 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 SPATA20Q8TB22 786 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 ZSCAN18Q8TBC5 510 aaPredicted RBP10.1□□□□□ -0.79
GGPS1-204ENST00000471812 TAS1R2Q8TE23 839 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 SEMA4DQ92854 862 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 TWNKQ96RR1 684 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 FNBP1Q96RU3 617 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 MMS19Q96T76 1030 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 ZNF518BQ9C0D4 1074 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 TBC1D17Q9HA65 648 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 KIAA1586Q9HCI6 787 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 DSEQ9UL01 958 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 TRAF3IP3Q9Y228 551 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 CCL26Q9Y258 94 aa10.1□□□□□ -0.79
GGPS1-204ENST00000471812 GPR179Q6PRD1 2367 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 USP34Q70CQ2 3546 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 HEPACAM2A8MVW5 462 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 BIN1O00499 593 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 F11P03951 625 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 BDNFP23560 247 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 ALDH1A3P47895 512 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 SOX9P48436 509 aa10.09□□□□□ -0.79
GGPS1-204ENST00000471812 PGFP49763 221 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms