RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 IL6RP08887 468 aaPredicted RBP4.87□□□□□ -1.63
RBM39-228ENST00000471635 EPHB2P29323 1055 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 PDE1AP54750 535 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 KHDC1LQ5JSQ8 128 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 PCID2Q5JVF3 399 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 ZNF626Q68DY1 528 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 RGS7BPQ6MZT1 257 aaPredicted RBP4.87□□□□□ -1.63
RBM39-228ENST00000471635 NAPRTQ6XQN6 538 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 ZNF804AQ7Z570 1209 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 GRAMD1CQ8IYS0 662 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 ZCRB1Q8TBF4 217 aaKnown RBP4.87□□□□□ -1.63
RBM39-228ENST00000471635 ATG4AQ8WYN0 398 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 CDK5RAP3Q96JB5 506 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 SH2D3AQ9BRG2 576 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 PTDSS2Q9BVG9 487 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 ARMT1Q9H993 441 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 SARS2Q9NP81 518 aaKnown RBP4.87□□□□□ -1.63
RBM39-228ENST00000471635 IP6K2Q9UHH9 426 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 SSX2IPQ9Y2D8 614 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 LATS1O95835 1130 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 ALDH2P05091 517 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 CYP2D6P10635 497 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 KELP23276 732 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 AKAP5P24588 427 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 AMOTQ4VCS5 1084 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 SLC44A4Q53GD3 710 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 EMC10Q5UCC4 262 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 PRAMEF17Q5VTA0 474 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 WDR53Q7Z5U6 358 aaPredicted RBP4.86□□□□□ -1.63
RBM39-228ENST00000471635 YTHDF3Q7Z739 585 aaKnown RBP4.86□□□□□ -1.63
RBM39-228ENST00000471635 SPATA3Q8NHX4 192 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 GLG1Q92896 1179 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 MAP3K14Q99558 947 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 CGRRF1Q99675 332 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 GLOD4Q9HC38 313 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 AASDHPPTQ9NRN7 309 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 DUSP22Q9NRW4 184 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 CPA4Q9UI42 421 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 PLEKHM1Q9Y4G2 1056 aa4.86□□□□□ -1.63
RBM39-228ENST00000471635 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.86□□□□□ -1.63
RBM39-228ENST00000471635 TISP43B9A030 160 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 TP73O15350 636 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 PF4V1P10720 104 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 PPIFP30405 207 aaKnown RBP4.85□□□□□ -1.63
RBM39-228ENST00000471635 NEK2P51955 445 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 CYP4F2P78329 520 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 PLBD2Q8NHP8 589 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 XAGE5Q8WWM1 108 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 WASF1Q92558 559 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 HPS3Q969F9 1004 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 R3HDM4Q96D70 268 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 MTFMTQ96DP5 389 aaKnown RBP4.85□□□□□ -1.63
RBM39-228ENST00000471635 HOOK2Q96ED9 719 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 MACROD1Q9BQ69 325 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 QTRT1Q9BXR0 403 aaKnown RBP4.85□□□□□ -1.63
RBM39-228ENST00000471635 NRIP3Q9NQ35 241 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 XPR1Q9UBH6 696 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 STAP2Q9UGK3 403 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 CCNL1Q9UK58 526 aaPredicted RBP4.85□□□□□ -1.63
RBM39-228ENST00000471635 NDRG4Q9ULP0 352 aaKnown RBP4.85□□□□□ -1.63
RBM39-228ENST00000471635 SH2B3Q9UQQ2 575 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 STXBP5LQ9Y2K9 1186 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 FER1L4A9Z1Z3 1794 aa4.85□□□□□ -1.63
RBM39-228ENST00000471635 hCG_1984214I3L0E3 225 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 VCAM1P19320 739 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 CERS1P27544 350 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 TUBA4AP68366 448 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 SSBP2P81877 361 aaPredicted RBP4.84□□□□□ -1.63
RBM39-228ENST00000471635 KLF9Q13886 244 aaPredicted RBP4.84□□□□□ -1.63
RBM39-228ENST00000471635 E2F2Q14209 437 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 ZNF267Q14586 743 aaPredicted RBP4.84□□□□□ -1.63
RBM39-228ENST00000471635 PTPROQ16827 1216 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 CEP78Q5JTW2 689 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
RBM39-228ENST00000471635 NEK8Q86SG6 692 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 MOGAT1Q96PD6 335 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 PUS7Q96PZ0 661 aaKnown RBP4.84□□□□□ -1.63
RBM39-228ENST00000471635 NUP88Q99567 741 aaPredicted RBP4.84□□□□□ -1.63
RBM39-228ENST00000471635 SEMA4CQ9C0C4 833 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 CNNM1Q9NRU3 951 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 ADAMTS5Q9UNA0 930 aa4.84□□□□□ -1.63
RBM39-228ENST00000471635 MRPS17Q9Y2R5 130 aaKnown RBP4.84□□□□□ -1.63
RBM39-228ENST00000471635 A1L4Q6 167 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 PPP6CO00743 305 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 OFD1O75665 1012 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 NPSP0C0P6 89 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 CT47B1P0C2W7 299 aaPredicted RBP4.83□□□□□ -1.64
RBM39-228ENST00000471635 VIPR2P41587 438 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 UCP3P55916 312 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 ETFDHQ16134 617 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 SUPT20HL1Q3ZLR7 823 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 SLC18B1Q6NT16 456 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 PARS2Q7L3T8 475 aaKnown RBP4.83□□□□□ -1.64
RBM39-228ENST00000471635 PNLDC1Q8NA58 520 aaKnown RBP4.83□□□□□ -1.64
RBM39-228ENST00000471635 CYP2W1Q8TAV3 490 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 RPL36ALQ969Q0 106 aaKnown RBP4.83□□□□□ -1.64
RBM39-228ENST00000471635 P2RX7Q99572 595 aaKnown RBP4.83□□□□□ -1.64
RBM39-228ENST00000471635 FSD1LQ9BXM9 530 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 TCF7L1Q9HCS4 588 aa4.83□□□□□ -1.64
RBM39-228ENST00000471635 SHOC2Q9UQ13 582 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms