RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 CEP85Q6P2H3 762 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 GRAMD1CQ8IYS0 662 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 KBTBD7Q8WVZ9 684 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 ATG4AQ8WYN0 398 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 MTFMTQ96DP5 389 aaKnown RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 FSD1LQ9BXM9 530 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 TRIM54Q9BYV2 358 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 SEMA4CQ9C0C4 833 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 TTYH3Q9C0H2 523 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 SARS2Q9NP81 518 aaKnown RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 DUSP22Q9NRW4 184 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 XPR1Q9UBH6 696 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 ZNF70Q9UC06 446 aaPredicted RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 SERTAD3Q9UJW9 196 aa3.98□□□□□ -1.77
COPS3-206ENST00000471414 NDRG4Q9ULP0 352 aaKnown RBP3.98□□□□□ -1.77
COPS3-206ENST00000471414 TISP43B9A030 160 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 ADAMTS3O15072 1205 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 JTBO76095 146 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 UBXN7O94888 489 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 THP07101 528 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 NPR1P16066 1061 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 HTR1BP28222 390 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 SLC11A2P49281 568 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 RAB27AP51159 221 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 CLCN2P51788 898 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 EIF2B5Q13144 721 aaKnown RBP3.97□□□□□ -1.77
COPS3-206ENST00000471414 ZIK1Q3SY52 487 aaPredicted RBP3.97□□□□□ -1.77
COPS3-206ENST00000471414 TREML2Q5T2D2 321 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 IFIT1BQ5T764 474 aaKnown RBP3.97□□□□□ -1.77
COPS3-206ENST00000471414 SUMO4Q6EEV6 95 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 ZNF66Q6ZN08 573 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 EPM2AIP1Q7L775 607 aaPredicted RBP3.97□□□□□ -1.77
COPS3-206ENST00000471414 GLCCI1Q86VQ1 547 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 GAS2L3Q86XJ1 694 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 DENND1CQ8IV53 801 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 RP9Q8TA86 221 aaKnown RBP3.97□□□□□ -1.77
COPS3-206ENST00000471414 SLC35G2Q8TBE7 412 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 JPH3Q8WXH2 748 aaPredicted RBP3.97□□□□□ -1.77
COPS3-206ENST00000471414 DDB2Q92466 427 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 ZNF778Q96MU6 729 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 MOGAT1Q96PD6 335 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 THAP7Q9BT49 309 aaPredicted RBP3.97□□□□□ -1.77
COPS3-206ENST00000471414 NMRK2Q9NPI5 230 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 ANLNQ9NQW6 1124 aa3.97□□□□□ -1.77
COPS3-206ENST00000471414 AP1G1O43747 822 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 FAM163BP0C2L3 166 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 CYP2C9P11712 490 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 NCLP19338 710 aaKnown RBP3.96□□□□□ -1.78
COPS3-206ENST00000471414 ABCG1P45844 678 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 UCP3P55916 312 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 GTF2H3Q13889 308 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 FGL2Q14314 439 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 AMOTQ4VCS5 1084 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 SLC44A4Q53GD3 710 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 ARHGAP40Q5TG30 622 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 RGS7BPQ6MZT1 257 aaPredicted RBP3.96□□□□□ -1.78
COPS3-206ENST00000471414 PCSK9Q8NBP7 692 aaKnown RBP3.96□□□□□ -1.78
COPS3-206ENST00000471414 SCARB1Q8WTV0 552 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 SOCS4Q8WXH5 440 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 ACO2Q99798 780 aaKnown RBP3.96□□□□□ -1.78
COPS3-206ENST00000471414 SMURF2Q9HAU4 748 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 ATP6V0A4Q9HBG4 840 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 PIH1D1Q9NWS0 290 aaKnown RBP3.96□□□□□ -1.78
COPS3-206ENST00000471414 ZNF180Q9UJW8 692 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 SHOC2Q9UQ13 582 aa3.96□□□□□ -1.78
COPS3-206ENST00000471414 ZNF804BA4D1E1 1349 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 hCG_2014768A0A024R1R8 64 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 A1L4Q6 167 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 TUSC2O75896 110 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 NDUFB7P17568 137 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 LRPAP1P30533 357 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 CYP2C18P33260 490 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 ALDH9A1P49189 494 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 EPHB1P54762 984 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 EEFSECP57772 596 aaKnown RBP3.95□□□□□ -1.78
COPS3-206ENST00000471414 CYP4F2P78329 520 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 MYO1EQ12965 1108 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 ZNF425Q6IV72 752 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 LAYNQ6UX15 382 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 SLC29A4Q7RTT9 530 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 OVCH2Q7RTZ1 564 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 ZNF804AQ7Z570 1209 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 ZNF280BQ86YH2 543 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 FAM177A1Q8N128 213 aaPredicted RBP3.95□□□□□ -1.78
COPS3-206ENST00000471414 PPP1R35Q8TAP8 253 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 GLG1Q92896 1179 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 RUNDC1Q96C34 613 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 NT5C1BQ96P26 610 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 P2RX7Q99572 595 aaKnown RBP3.95□□□□□ -1.78
COPS3-206ENST00000471414 CXorf36Q9H7Y0 433 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 ARMT1Q9H993 441 aa3.95□□□□□ -1.78
COPS3-206ENST00000471414 RGS17Q9UGC6 210 aaPredicted RBP3.95□□□□□ -1.78
COPS3-206ENST00000471414 THRAP3Q9Y2W1 955 aaKnown RBP3.95□□□□□ -1.78
COPS3-206ENST00000471414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.95□□□□□ -1.78
COPS3-206ENST00000471414 hCG_1984214I3L0E3 225 aa3.94□□□□□ -1.78
COPS3-206ENST00000471414 FESP07332 822 aa3.94□□□□□ -1.78
COPS3-206ENST00000471414 HSPA6P17066 643 aa3.94□□□□□ -1.78
COPS3-206ENST00000471414 KCNA3P22001 575 aa3.94□□□□□ -1.78
COPS3-206ENST00000471414 CTGFP29279 349 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms