RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TTYH3Q9C0H2 523 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 SEPSECSQ9HD40 501 aaKnown RBP7.64□□□□□ -1.19
SMC5-202ENST00000471372 CLIC5Q9NZA1 410 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 SLC45A1Q9Y2W3 748 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 TBKBP1A7MCY6 615 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 CCP110O43303 1012 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 RRP9O43818 475 aaKnown RBP7.63□□□□□ -1.19
SMC5-202ENST00000471372 PRSS23O95084 383 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 KLRK1P26718 216 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 TOB1P50616 345 aaPredicted RBP7.63□□□□□ -1.19
SMC5-202ENST00000471372 CCR5P51681 352 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 BCAT1P54687 386 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 NSUN2Q08J23 767 aaKnown RBP eCLIP7.63□□□□□ -1.19
SMC5-202ENST00000471372 SCAPQ12770 1279 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 NFYCQ13952 458 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 CSRP2Q16527 193 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 TRIM71Q2Q1W2 868 aaKnown RBP7.63□□□□□ -1.19
SMC5-202ENST00000471372 ATXN7L2Q5T6C5 722 aaPredicted RBP7.63□□□□□ -1.19
SMC5-202ENST00000471372 MRNIPQ6NTE8 343 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 C16orf54Q6UWD8 224 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 RRAGAQ7L523 313 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 SP8Q8IXZ3 490 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 KLHL36Q8N4N3 616 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 FITM2Q8N6M3 262 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 TXNDC5Q8NBS9 432 aaKnown RBP7.63□□□□□ -1.19
SMC5-202ENST00000471372 RNF169Q8NCN4 708 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 CPT1CQ8TCG5 803 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 FAM168AQ92567 244 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 RRP36Q96EU6 259 aaKnown RBP7.63□□□□□ -1.19
SMC5-202ENST00000471372 PWWP2AQ96N64 755 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 SLC46A1Q96NT5 459 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 TLR10Q9BXR5 811 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 SIK2Q9H0K1 926 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 TP63Q9H3D4 680 aaPredicted RBP7.63□□□□□ -1.19
SMC5-202ENST00000471372 NELFAQ9H3P2 528 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 NR2E1Q9Y466 385 aa7.63□□□□□ -1.19
SMC5-202ENST00000471372 H0Y3Z8 333 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 COQ9O75208 318 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 SEMA7AO75326 666 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 GLP2RO95838 553 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 ITGB1P05556 798 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 XRCC6P12956 609 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMC5-202ENST00000471372 RXRAP19793 462 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 ALDH18A1P54886 795 aaKnown RBP7.62□□□□□ -1.19
SMC5-202ENST00000471372 SLC12A1Q13621 1099 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 PDE1CQ14123 709 aaPredicted RBP7.62□□□□□ -1.19
SMC5-202ENST00000471372 INSCQ1MX18 579 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 ZIK1Q3SY52 487 aaPredicted RBP7.62□□□□□ -1.19
SMC5-202ENST00000471372 VWA3BQ502W6 1294 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 CACHD1Q5VU97 1274 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 NGDNQ8NEJ9 315 aaKnown RBP7.62□□□□□ -1.19
SMC5-202ENST00000471372 LSM14BQ9BX40 385 aaKnown RBP7.62□□□□□ -1.19
SMC5-202ENST00000471372 ZBTB26Q9HCK0 441 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 TBC1D22BQ9NU19 505 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 TMEM160Q9NX00 188 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 ZSCAN32Q9NX65 697 aa7.62□□□□□ -1.19
SMC5-202ENST00000471372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMC5-202ENST00000471372 DNMT3BQ9UBC3 853 aaKnown RBP7.62□□□□□ -1.19
SMC5-202ENST00000471372 SETD1BQ9UPS6 1966 aaKnown RBP7.61□□□□□ -1.19
SMC5-202ENST00000471372 BIN1O00499 593 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 NTSR2O95665 410 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 CYP2C9P11712 490 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 TAL1P17542 331 aaPredicted RBP7.61□□□□□ -1.19
SMC5-202ENST00000471372 CHRM3P20309 590 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 ACTR2P61160 394 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 UBE3AQ05086 875 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 MAPK7Q13164 816 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 RIN1Q13671 783 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 IQCB1Q15051 598 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 BTBD16Q32M84 506 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 ZNF750Q32MQ0 723 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 NOMO2Q5JPE7 1267 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 CCDC30Q5VVM6 783 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 RALYLQ86SE5 291 aaKnown RBP7.61□□□□□ -1.19
SMC5-202ENST00000471372 RASGRP3Q8IV61 690 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 SMCR8Q8TEV9 937 aaPredicted RBP7.61□□□□□ -1.19
SMC5-202ENST00000471372 TFAP2CQ92754 450 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 MBD6Q96DN6 1003 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 FMNL2Q96PY5 1086 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 TRAPPC9Q96Q05 1148 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 RBM15Q96T37 977 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMC5-202ENST00000471372 BARD1Q99728 777 aaKnown RBP7.61□□□□□ -1.19
SMC5-202ENST00000471372 TCF25Q9BQ70 676 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 AGO3Q9H9G7 860 aaKnown RBP7.61□□□□□ -1.19
SMC5-202ENST00000471372 ETAA1Q9NY74 926 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 NTMQ9P121 344 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 CA14Q9ULX7 337 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 DAPP1Q9UN19 280 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 JAG2Q9Y219 1238 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 HPSEQ9Y251 543 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 AFG3L2Q9Y4W6 797 aa7.61□□□□□ -1.19
SMC5-202ENST00000471372 AQP7P3A6NL99 342 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 MATN2O00339 956 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 FIBPO43427 364 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 PIAS2O75928 621 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 TK1P04183 234 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 PRKCBP05771 671 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 ANXA6P08133 673 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 SRGAP2BP0DMP2 458 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms