RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 F8W8V4 182 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 HAUS5O94927 633 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 CNOT4O95628 575 aaKnown RBP6.73□□□□□ -1.33
CKS1B-204ENST00000471245 ABHD16AO95870 558 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 AMHP03971 560 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 SBK3P0C264 359 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 RARBP10826 455 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 HDCP19113 662 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 ABCB4P21439 1286 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 IL6STP40189 918 aaPredicted RBP6.73□□□□□ -1.33
CKS1B-204ENST00000471245 KCNC1P48547 511 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 CLRN1P58418 232 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 SLC44A4Q53GD3 710 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 HIBCHQ6NVY1 386 aaPredicted RBP6.73□□□□□ -1.33
CKS1B-204ENST00000471245 DOK3Q7L591 496 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 SKAP1Q86WV1 359 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 LIX1LQ8IVB5 337 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 CCDC33Q8N5R6 958 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 MAML1Q92585 1016 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 ARL8AQ96BM9 186 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 KCNC2Q96PR1 638 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 MYOCQ99972 504 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 SERHLQ9NQF3 203 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 SRRDQ9UH36 339 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 OAZ3Q9UMX2 235 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 BRCA1P38398 1863 aaKnown RBP6.73□□□□□ -1.33
CKS1B-204ENST00000471245 NSD2O96028 1365 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 A0A1W2PRX2 142 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 PRSS29PA6NIE9 313 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 BTN3A1O00481 513 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 APOL1O14791 398 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 KIAA0391O15091 583 aaKnown RBP6.72□□□□□ -1.33
CKS1B-204ENST00000471245 HOXA3O43365 443 aaPredicted RBP6.72□□□□□ -1.33
CKS1B-204ENST00000471245 B4GALT3O60512 393 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 GNAI2P04899 355 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 THP07101 528 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 KCNJ5P48544 419 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 PRELPP51888 382 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 HTRA4P83105 476 aaPredicted RBP6.72□□□□□ -1.33
CKS1B-204ENST00000471245 PMS2P11Q13670 270 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 ZNF529Q6P280 563 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 AOPEPQ8N6M6 819 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 ANKRD42Q8N9B4 389 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 SLC35B2Q8TB61 432 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 NEIL1Q96FI4 390 aaPredicted RBP6.72□□□□□ -1.33
CKS1B-204ENST00000471245 ZNF518BQ9C0D4 1074 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 NELFAQ9H3P2 528 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 SEC61A2Q9H9S3 476 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 SMURF2Q9HAU4 748 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 SACM1LQ9NTJ5 587 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 RAPGEFL1Q9UHV5 662 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 PKD1L3Q7Z443 1732 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 TTC21BQ7Z4L5 1316 aa6.72□□□□□ -1.33
CKS1B-204ENST00000471245 ITGB4P16144 1822 aa6.71□□□□□ -1.33
CKS1B-204ENST00000471245 ANKRD36BQ8N2N9 1353 aa6.71□□□□□ -1.33
CKS1B-204ENST00000471245 C4BP0C0L5 1744 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 TCRBV7S2A1N4TA0A589 114 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 TBC1D4O60343 1298 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 TRIM13O60858 407 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 TOMM70O94826 608 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 GJB1P08034 283 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 HALP42357 657 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 RPS16P62249 146 aaKnown RBP6.71□□□□□ -1.34
CKS1B-204ENST00000471245 SLC13A2Q13183 592 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 PDCD2Q16342 344 aaPredicted RBP6.71□□□□□ -1.34
CKS1B-204ENST00000471245 BMT2Q1RMZ1 405 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 VMACQ2NL98 169 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 GPR135Q8IZ08 494 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 NKAPQ8N5F7 415 aaKnown RBP6.71□□□□□ -1.34
CKS1B-204ENST00000471245 GIMAP8Q8ND71 665 aaPredicted RBP6.71□□□□□ -1.34
CKS1B-204ENST00000471245 TMEM41AQ96HV5 264 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 GPR35Q9HC97 309 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 SLAMF7Q9NQ25 335 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 MYO1AQ9UBC5 1043 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.71□□□□□ -1.34
CKS1B-204ENST00000471245 IGSF1Q8N6C5 1336 aa6.71□□□□□ -1.34
CKS1B-204ENST00000471245 CENPJQ9HC77 1338 aaPredicted RBP6.71□□□□□ -1.34
CKS1B-204ENST00000471245 ADAMTS20P59510 1910 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 A0A087WV62 115 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 MBD3L4A6NDZ8 208 aaPredicted RBP6.7□□□□□ -1.34
CKS1B-204ENST00000471245 MBD3L3A6NE82 208 aaPredicted RBP6.7□□□□□ -1.34
CKS1B-204ENST00000471245 TBKBP1A7MCY6 615 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 ADAMTS3O15072 1205 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 NOBOXO60393 691 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 B4GALT4O60513 344 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 NBNO60934 754 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 CR2P20023 1033 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 SLC6A4P31645 630 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 TECP42680 631 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 NOMO3P69849 1222 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 POU6F2P78424 691 aaPredicted RBP6.7□□□□□ -1.34
CKS1B-204ENST00000471245 DUSP8Q13202 625 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 RAB32Q13637 225 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 PRR16Q569H4 304 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 C3orf38Q5JPI3 329 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 LMBRD2Q68DH5 695 aaPredicted RBP6.7□□□□□ -1.34
CKS1B-204ENST00000471245 MFSD5Q6N075 450 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 SPOCD1Q6ZMY3 1216 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 APBB1IPQ7Z5R6 666 aaPredicted RBP6.7□□□□□ -1.34
CKS1B-204ENST00000471245 MICU3Q86XE3 530 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms