RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 LILRA4P59901 499 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 SPAG1Q07617 926 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 STK3Q13188 491 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 SEZ6Q53EL9 994 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 EFCAB13Q8IY85 973 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 ALLCQ8N6M5 410 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 ERMNQ8TAM6 284 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 SPPL2BQ8TCT7 592 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 ZBTB45Q96K62 511 aaPredicted RBP12.99□□□□□ -0.33
LSM2-209ENST00000470083 SENP8Q96LD8 212 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 TMEM60Q9H2L4 133 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 TMEM206Q9H813 350 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
LSM2-209ENST00000470083 SPTA1P02549 2419 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 SGK1O00141 431 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 ATXN7O15265 892 aaPredicted RBP12.98□□□□□ -0.33
LSM2-209ENST00000470083 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
LSM2-209ENST00000470083 NFATC1O95644 943 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 CYP11A1P05108 521 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 MUTP22033 750 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 PAX3P23760 479 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 CDR1P51861 262 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
LSM2-209ENST00000470083 RUFY3Q7L099 469 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 TMPRSS7Q7RTY8 843 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 SLCO6A1Q86UG4 719 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 IL17RCQ8NAC3 791 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 TXNDC5Q8NBS9 432 aaKnown RBP12.98□□□□□ -0.33
LSM2-209ENST00000470083 TTC16Q8NEE8 873 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 HMGB4Q8WW32 186 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 BHMT2Q9H2M3 363 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
LSM2-209ENST00000470083 KIAA1522Q9P206 1035 aaPredicted RBP12.98□□□□□ -0.33
LSM2-209ENST00000470083 RAI2Q9Y5P3 530 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 HECTD1Q9ULT8 2610 aa12.98□□□□□ -0.33
LSM2-209ENST00000470083 PPEF2O14830 753 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 CBFA2T3O75081 653 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 CDC45O75419 566 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 TADA3O75528 432 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 KLF8O95600 359 aaPredicted RBP12.97□□□□□ -0.33
LSM2-209ENST00000470083 CKMP06732 381 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 CLTAP09496 248 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 USP17L7P0C7H9 530 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 CSH1P0DML2 217 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 CSH2P0DML3 217 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 GUCY2FP51841 1108 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 ZNF33AQ06730 810 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 MCL1Q07820 350 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 CYP4F3Q08477 520 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 GAB4Q2WGN9 574 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 EOGTQ5NDL2 527 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 SLC36A4Q6YBV0 504 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 ZNF605Q86T29 641 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 DAW1Q8N136 415 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 LSM14AQ8ND56 463 aaKnown RBP12.97□□□□□ -0.33
LSM2-209ENST00000470083 SLC22A12Q96S37 553 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 LARP6Q9BRS8 491 aaKnown RBP12.97□□□□□ -0.33
LSM2-209ENST00000470083 LINC00597Q9H2U6 94 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 UXTQ9UBK9 157 aaPredicted RBP12.97□□□□□ -0.33
LSM2-209ENST00000470083 DSEQ9UL01 958 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 PCDH15Q96QU1 1955 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 KIAA1549LQ6ZVL6 1849 aa12.97□□□□□ -0.33
LSM2-209ENST00000470083 TRAV19A0A0A6YYK7 116 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 TCRBV21S2A2A0A5A6 115 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 CLDN3O15551 220 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 TCF3P15923 654 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 ABCG1P45844 678 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 LARP1BQ659C4 914 aaKnown RBP12.96□□□□□ -0.33
LSM2-209ENST00000470083 HAUS3Q68CZ6 603 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 LRRTM3Q86VH5 581 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 PGBD3Q8N328 593 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 SH3RF2Q8TEC5 729 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 TSPAN18Q96SJ8 248 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 CYP2S1Q96SQ9 504 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 TRPC7Q9HCX4 862 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 PCOLCE2Q9UKZ9 415 aa12.96□□□□□ -0.33
LSM2-209ENST00000470083 MAGED2Q9UNF1 606 aaPredicted RBP12.96□□□□□ -0.33
LSM2-209ENST00000470083 TNRC6BQ9UPQ9 1833 aaKnown RBP12.96□□□□□ -0.33
LSM2-209ENST00000470083 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.34
LSM2-209ENST00000470083 ADAM23O75077 832 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 HIP1RO75146 1068 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 TIE1P35590 1138 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 KIR2DL1P43626 348 aaPredicted RBP12.95□□□□□ -0.34
LSM2-209ENST00000470083 SCRN1Q12765 414 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 STRN3Q13033 797 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 ECM1Q16610 540 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 SPATA1Q5VX52 437 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 ZPBP2Q6X784 338 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 SFTPA1Q8IWL2 248 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 ZNF843Q8N446 348 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 DEFB119Q8N690 84 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 STKLD1Q8NE28 680 aa12.95□□□□□ -0.34
LSM2-209ENST00000470083 SPATA18Q8TC71 538 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms