RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PLA2G4BP0C869 781 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 RAG1P15918 1043 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 ACAT1P24752 427 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 HIRAP54198 1017 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 CAMK2BQ13554 666 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 SPTY2D1Q68D10 685 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 SNRNP48Q6IEG0 339 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 KIF6Q6ZMV9 814 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 PQLC1Q8N2U9 271 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC25A41Q8N5S1 370 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 TTC13Q8NBP0 860 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 ADCY4Q8NFM4 1077 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 FBXO27Q8NI29 283 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 RAB3IL1Q8TBN0 382 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 ACTRT2Q8TDY3 377 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 PRPF18Q99633 342 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 GPATCH1Q9BRR8 931 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 DHRS4Q9BTZ2 278 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 GBA3Q9H227 469 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 STN1Q9H668 368 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 VPS37BQ9H9H4 285 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 EPS15L1Q9UBC2 864 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 GTF3C4Q9UKN8 822 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 ATRNL1Q5VV63 1379 aa9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 TNRC6CQ9HCJ0 1690 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-207ENST00000469334 WDR91A4D1P6 747 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 CAPN8A6NHC0 703 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 F5H6K3 240 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ALOX15BO15296 676 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 POLR2MP0CAP2 368 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 KLRC2P26717 231 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 SERPINB6P35237 376 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TCF7P36402 384 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 RXRGP48443 463 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TRPC1P48995 793 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 FMO5P49326 533 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 KDSRQ06136 332 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 PTP4A2Q12974 167 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 MORF4L2Q15014 288 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 MEX3CQ5U5Q3 659 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ELMSAN1Q6PJG2 1045 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TPTE2Q6XPS3 522 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ADGRA1Q86SQ6 560 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 CCDC33Q8N5R6 958 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 LSM14AQ8ND56 463 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 APOPT1Q96IL0 206 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 LRGUKQ96M69 825 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 INTS2Q9H0H0 1204 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 MKNK2Q9HBH9 465 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ATAD3AQ9NVI7 634 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ITGA11Q9UKX5 1188 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TAF1LQ8IZX4 1826 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ASTN1O14525 1302 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 USP17L21D6R901 530 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 H0YJX3 145 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 SMIM22K7EJ46 135 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 NDUFB5O43674 189 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 CYTH3O43739 400 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 FAM189A1O60320 539 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 KRT18P05783 430 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 RBP3P10745 1247 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TSHRP16473 764 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 POLR2EP19388 210 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ADSSP30520 456 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ETV4P43268 484 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 EIF2B2P49770 351 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 MECOMQ03112 1051 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 PDIA2Q13087 525 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TRIP13Q15645 432 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC35G1Q2M3R5 365 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 RABGAP1LQ5R372 815 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ATG16L1Q676U5 607 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ZFP1Q6P2D0 407 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 KBTBD6Q86V97 674 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 PALB2Q86YC2 1186 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 DZIP1Q86YF9 867 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TERB1Q8NA31 727 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 TSPAN14Q8NG11 270 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 MZB1Q8WU39 189 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 PWWP2AQ96N64 755 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 PHF12Q96QT6 1004 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 SRPK1Q96SB4 655 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 NUP85Q9BW27 656 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ANO3Q9BYT9 981 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC2A11Q9BYW1 496 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC38A7Q9NVC3 462 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 CNTN3Q9P232 1028 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 HERC5Q9UII4 1024 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 CNOT11Q9UKZ1 510 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms