RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 VAV2P52735 878 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 HADHBP55084 474 aaKnown RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 GFPT1Q06210 699 aaPredicted RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 SGO2Q562F6 1265 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 TDRD12Q587J7 1177 aaKnown RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 DSTYKQ6XUX3 929 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 TMCO2Q7Z6W1 182 aaPredicted RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 DDX53Q86TM3 631 aaKnown RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 PHF13Q86YI8 300 aaPredicted RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 FUKQ8N0W3 1084 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 CCAR2Q8N163 923 aaKnown RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 MYCBPAPQ8TBZ2 947 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 PIK3R5Q8WYR1 880 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 RABGGTAQ92696 567 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 HERC2P3Q9BVR0 1158 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 PLVAPQ9BX97 442 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 UBXN6Q9BZV1 441 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 DNAI2Q9GZS0 605 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 ZCWPW1Q9H0M4 648 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 SNX25Q9H3E2 840 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 CRTAC1Q9NQ79 661 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 DDX43Q9NXZ2 648 aaKnown RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 SPG21Q9NZD8 308 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 PRG3Q9Y2Y8 225 aaPredicted RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 BACE2Q9Y5Z0 518 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 CHD9Q3L8U1 2897 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 A0A0A6YYK5 440 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 TCRBV5S1A1TA0A578 114 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 ANKRD62A6NC57 917 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 RCCD1A6NED2 376 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 OR6C75A6NL08 312 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 A8MXQ7 604 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 I3L4J1 428 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 HCRTO43612 131 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 ZNF500O60304 480 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 MTA2O94776 668 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 SOD2P04179 222 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 CFHP08603 1231 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 CCDC175P0C221 793 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 TMEM253P0C7T8 217 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 MMP8P22894 467 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 TKTP29401 623 aaKnown RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 USP8P40818 1118 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 GPD2P43304 727 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 GABRB2P47870 512 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 DSG1Q02413 1049 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 PAN2Q504Q3 1202 aaKnown RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 INTS6LQ5JSJ4 861 aaKnown RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 C9orf50Q5SZB4 431 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 OVOS1Q6IE37 1185 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 SLC8B1Q6J4K2 584 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 ACAD10Q6JQN1 1059 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 MON1BQ7L1V2 547 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 ACOT1Q86TX2 421 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 FIBCD1Q8N539 461 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 C12orf29Q8N999 325 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 ANKRD52Q8NB46 1076 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 ACRBPQ8NEB7 543 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 OR6B3Q8NGW1 331 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 OR10T2Q8NGX3 314 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 SLC35F5Q8WV83 523 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 YME1L1Q96TA2 773 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 SYT15Q9BQS2 421 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 CSNK1G1Q9HCP0 422 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 AVENQ9NQS1 362 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 TAS2R14Q9NYV8 317 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 LZTS1Q9Y250 596 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 PCDHA13Q9Y5I0 950 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 COL4A4P53420 1690 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 NLRC5Q86WI3 1866 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 PTPRDP23468 1912 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 NCANO14594 1321 aa8.65□□□□□ -1.02
NPHP3-204ENST00000469232 TNRC18O15417 2968 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-204ENST00000469232 GOLGA6L9A6NEM1 432 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 CCP110O43303 1012 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 THAP12O43422 761 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 MICAL2O94851 1124 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 C1RP00736 705 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 CALCAP01258 141 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 CYP1A2P05177 515 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 H2AFZP0C0S5 128 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 DNAJB2P25686 324 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 MAGEA1P43355 309 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 CYP27A1Q02318 531 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 YWHAHQ04917 246 aaPredicted RBP8.65□□□□□ -1.03
NPHP3-204ENST00000469232 SMARCB1Q12824 385 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 SHHQ15465 462 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 SPA17Q15506 151 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 MAPRE1Q15691 268 aaKnown RBP8.65□□□□□ -1.03
NPHP3-204ENST00000469232 USP41Q3LFD5 358 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 CFAP221Q4G0U5 840 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 ZNF394Q53GI3 561 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 CCDC122Q5T0U0 273 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.03
NPHP3-204ENST00000469232 FAM171A1Q5VUB5 890 aa8.65□□□□□ -1.03
NPHP3-204ENST00000469232 DENND1BQ6P3S1 775 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms