RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 STK32AQ8WU08 396 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 MCRS1Q96EZ8 462 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 UROC1Q96N76 676 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 CPXM1Q96SM3 734 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 MRPL45Q9BRJ2 306 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 FUT8Q9BYC5 575 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 FAM129AQ9BZQ8 928 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 RNF39Q9H2S5 420 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 RSAD1Q9HA92 442 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 STARD7Q9NQZ5 370 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 METTL5Q9NRN9 209 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 DMGDHQ9UI17 866 aaKnown RBP9.86□□□□□ -0.83
SMC1A-205ENST00000469129 PADI3Q9ULW8 664 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 L1RE1Q9UN81 338 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 PTPN22Q9Y2R2 807 aa9.86□□□□□ -0.83
SMC1A-205ENST00000469129 GRIN2DO15399 1336 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 A0A1W2PQ45 241 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 A0A1W2PQY0 241 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 MAP2K7O14733 419 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 FSCN2O14926 492 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 KRT1P04264 644 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 ERBB2P04626 1255 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 KRT7P08729 469 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 PYGMP11217 842 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 PSMA2P25787 234 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 CD52P31358 61 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 PTPN7P35236 360 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 GNL1P36915 607 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 SCNN1AP37088 669 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 ACADSBP45954 432 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 SLC7A5Q01650 507 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 SOX4Q06945 474 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 SMC1AQ14683 1233 aaKnown RBP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 CASP8Q14790 479 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 SOWAHAQ2M3V2 549 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 FAM102AQ5T9C2 384 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 LLGL2Q6P1M3 1020 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 SYDE1Q6ZW31 735 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 PHLDB2Q86SQ0 1253 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 ACOT1Q86TX2 421 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 RCOR2Q8IZ40 523 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 CRYBG2Q8N1P7 616 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 WDTC1Q8N5D0 677 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 KBTBD7Q8WVZ9 684 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 CAVIN3Q969G5 261 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 TRIM7Q9C029 511 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 CXCL16Q9H2A7 254 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 TSPYL2Q9H2G4 693 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-205ENST00000469129 EPB41L5Q9HCM4 733 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 ST7Q9NRC1 585 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 ASNSD1Q9NWL6 643 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 PCYOX1Q9UHG3 505 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 HTTP42858 3142 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 MICAL3Q7RTP6 2002 aa9.85□□□□□ -0.83
SMC1A-205ENST00000469129 A0A0U1RQF3 1178 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 ARL5CA6NH57 179 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 PODXLO00592 558 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 CYB561D2O14569 222 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 RNF8O76064 485 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 ODC1P11926 461 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 GPD1P21695 349 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 GJC1P36383 396 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 LHX1P48742 406 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 LILRA4P59901 499 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 RPL7AP62424 266 aaKnown RBP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 HLTFQ14527 1009 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 HSP90B2PQ58FF3 399 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 ZFYVE27Q5T4F4 411 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 ZNF618Q5T7W0 954 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 PPP1R26Q5T8A7 1209 aaPredicted RBP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 OR6B2Q6IFH4 312 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 CCDC137Q6PK04 289 aaKnown RBP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 TMEM130Q8N3G9 435 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 GOLGA6L1Q8N7Z2 621 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 ANKRD52Q8NB46 1076 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 SLC43A3Q8NBI5 491 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 HDAC7Q8WUI4 952 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 SLCO2A1Q92959 643 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 MAGOHBQ96A72 148 aaKnown RBP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 PKNOX2Q96KN3 472 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 ZFP42Q96MM3 310 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 GAD1Q99259 594 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 FTHL17Q9BXU8 183 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 AGO3Q9H9G7 860 aaKnown RBP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 GOLGA2P5Q9HBQ8 144 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 TRMT13Q9NUP7 481 aaKnown RBP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 FAM49BQ9NUQ9 324 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 AMACRQ9UHK6 382 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 FEZ2Q9UHY8 353 aaPredicted RBP9.84□□□□□ -0.83
SMC1A-205ENST00000469129 CYTH4Q9UIA0 394 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 DSEQ9UL01 958 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 PTCH2Q9Y6C5 1203 aa9.84□□□□□ -0.83
SMC1A-205ENST00000469129 BHMG1C9JSJ3 638 aaPredicted RBP9.83□□□□□ -0.84
SMC1A-205ENST00000469129 E5RJQ4 531 aa9.83□□□□□ -0.84
SMC1A-205ENST00000469129 ARVCFO00192 962 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms