RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 BHMT2Q9H2M3 363 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 AZI2Q9H6S1 392 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 TUFT1Q9NNX1 390 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 TNFRSF12AQ9NP84 129 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 NRBP2Q9NSY0 501 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 BLOC1S4Q9NUP1 217 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 WRAP73Q9P2S5 460 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 USP25Q9UHP3 1055 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 RWDD3Q9Y3V2 267 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 TRAF6Q9Y4K3 522 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 PCDHA2Q9Y5H9 948 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 MORC2Q9Y6X9 1032 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 PLXNB2O15031 1838 aa4.51□□□□□ -1.69
TMEM39A-204ENST00000468545 A0A1W2PQJ5 194 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 MYMKA6NI61 221 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 H7BY64 318 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 NKRFO15226 690 aaKnown RBP eCLIP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ADCY6O43306 1168 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 MSCO60682 206 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 USO1O60763 962 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 DKC1O60832 514 aaKnown RBP eCLIP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ASMTLO95671 621 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 EYA4O95677 639 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 PGK1P00558 417 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 RPN1P04843 607 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ZNF286BP0CG31 522 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 AKR1A1P14550 325 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 TACR1P25103 407 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 YWHABP31946 246 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 BCL6P41182 706 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 GALK1P51570 392 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 LBX1P52954 281 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 NPEPPSP55786 919 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ERVFRD-1P60508 538 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 IGBP1P78318 339 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ARHGAP1Q07960 439 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 LSAMPQ13449 338 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 POSTNQ15063 836 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 KIZQ2M2Z5 673 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 DUSP28Q4G0W2 176 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 TMEM119Q4V9L6 283 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 FNDC3BQ53EP0 1204 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ADGRF1Q5T601 910 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 L1TD1Q5T7N2 865 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 PLA2G4FQ68DD2 849 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 B3GNT9Q6UX72 402 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 OTUD6AQ7L8S5 288 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 MTDHQ86UE4 582 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 TLK2Q86UE8 772 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 SMAP1Q8IYB5 467 aaPredicted RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 GSTCDQ8NEC7 633 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 RDM1Q8NG50 284 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ATP6V0A1Q93050 837 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 CCDC47Q96A33 483 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 CEP170P1Q96L14 293 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 PCYT2Q99447 389 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 C7orf25Q9BPX7 421 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ANP32EQ9BTT0 268 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 LRRC27Q9C0I9 530 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 TSPY26PQ9H489 355 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 SPC25Q9HBM1 224 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 MARCH2Q9P0N8 246 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 TBC1D7Q9P0N9 293 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 NDOR1Q9UHB4 597 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 FBXL7Q9UJT9 491 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 MAN1B1Q9UKM7 699 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 PCDHA5Q9Y5H7 936 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 ZSWIM8A7E2V4 1837 aa4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 RBBP6Q7Z6E9 1792 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-204ENST00000468545 LCTP09848 1927 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 OR14I1A6ND48 311 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 MYADML2A6NDP7 307 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 ZNF503-AS2A6NEH8 195 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 C22orf46C9J442 243 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PPP1R12AO14974 1030 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 SLC26A4O43511 780 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 ZEB2O60315 1214 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PPFIA4O75335 1185 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 HMGCRP04035 888 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 FUCA1P04066 466 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 LGALS2P05162 132 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 MMP3P08254 477 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 HSPA1AP0DMV8 641 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 HSPA1BP0DMV9 641 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 GLI4P10075 376 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 RARBP10826 455 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 HSPA8P11142 646 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 CYBAP13498 195 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 CYP11B2P19099 503 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 CTCFP49711 727 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 SLC12A3P55017 1021 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PRMT2P55345 433 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 SOX10P56693 466 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PRKCEQ02156 737 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 GIT2Q14161 759 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PLCB4Q15147 1175 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 LRRC41Q15345 812 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 DGKDQ16760 1214 aa4.49□□□□□ -1.69
TMEM39A-204ENST00000468545 PLEKHG4Q58EX7 1191 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms