RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DRC7Q8IY82 874 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 FUKQ8N0W3 1084 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 SLC2A14Q8TDB8 520 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 SLC22A17Q8WUG5 538 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 ANP32BQ92688 251 aaKnown RBP16.15■□□□□ 0.18
SNIP1-202ENST00000468040 SYN2Q92777 582 aaPredicted RBP16.15■□□□□ 0.18
SNIP1-202ENST00000468040 CDX2Q99626 313 aaPredicted RBP16.15■□□□□ 0.18
SNIP1-202ENST00000468040 HNRNPABQ99729 332 aaKnown RBP16.15■□□□□ 0.18
SNIP1-202ENST00000468040 MED10Q9BTT4 135 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 B3GNT5Q9BYG0 378 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 PLEKHA4Q9H4M7 779 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 FAM49BQ9NUQ9 324 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 FBXW11Q9UKB1 542 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 HCFC2Q9Y5Z7 792 aa16.15■□□□□ 0.18
SNIP1-202ENST00000468040 PRRG1O14668 218 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 THAP12O43422 761 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 NCK2O43639 380 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 SRGAP2BP0DMP2 458 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 CCDC130P13994 396 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 KRT9P35527 623 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 MAGEA11P43364 429 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 TUFMP49411 452 aaKnown RBP16.14■□□□□ 0.17
SNIP1-202ENST00000468040 TBX2Q13207 712 aaPredicted RBP16.14■□□□□ 0.17
SNIP1-202ENST00000468040 ASIC2Q16515 512 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 CCDC142Q17RM4 750 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 LIN9Q5TKA1 542 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 VSTM1Q6UX27 236 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 SLC47A2Q86VL8 602 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 CNGA4Q8IV77 575 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 TCEAL8Q8IYN2 117 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 ATAD1Q8NBU5 361 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 KREMEN2Q8NCW0 462 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 HDAC7Q8WUI4 952 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 SMARCD1Q96GM5 515 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 LPIN3Q9BQK8 851 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 CYP4F11Q9HBI6 524 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 MTMR10Q9NXD2 777 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 IMPACTQ9P2X3 320 aa16.14■□□□□ 0.17
SNIP1-202ENST00000468040 MYO9BQ13459 2157 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 O00370 1275 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 MFAP3LO75121 409 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 FAM200BP0CF97 657 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 FOSL2P15408 326 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 CYP11B1P15538 503 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
SNIP1-202ENST00000468040 SLC8A3P57103 927 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 ARID5AQ03989 594 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 HYAL1Q12794 435 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 DUSP4Q13115 394 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 CNGA2Q16280 664 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 MEA1Q16626 185 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 TSR1Q2NL82 804 aaKnown RBP16.13■□□□□ 0.17
SNIP1-202ENST00000468040 MGAT5BQ3V5L5 792 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 PPP1R26Q5T8A7 1209 aaPredicted RBP16.13■□□□□ 0.17
SNIP1-202ENST00000468040 LCLAT1Q6UWP7 414 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 FAM35AQ86V20 835 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 EFHBQ8N7U6 833 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 OR8K1Q8NGG5 319 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 ZNF606Q8WXB4 792 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 MYLIPQ8WY64 445 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 TFAP2BQ92481 460 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 CASP10Q92851 521 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 GUCD1Q96NT3 240 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 SEPT5Q99719 369 aaPredicted RBP16.13■□□□□ 0.17
SNIP1-202ENST00000468040 ZNF518BQ9C0D4 1074 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 KRT82Q9NSB4 513 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 HESX1Q9UBX0 185 aa16.13■□□□□ 0.17
SNIP1-202ENST00000468040 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNIP1-202ENST00000468040 PLXNA3P51805 1871 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 AKR1B15C9JRZ8 316 aaPredicted RBP16.12■□□□□ 0.17
SNIP1-202ENST00000468040 CLDN5O00501 218 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 TRIM66O15016 1216 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 VNN2O95498 520 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 HAPLN1P10915 354 aaPredicted RBP16.12■□□□□ 0.17
SNIP1-202ENST00000468040 EPCAMP16422 314 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 BDNFP23560 247 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 CYP2F1P24903 491 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 ADORA2BP29275 332 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 RPL10AP62906 217 aaKnown RBP16.12■□□□□ 0.17
SNIP1-202ENST00000468040 PLD1Q13393 1074 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 KCNC3Q14003 757 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 GOLGA7BQ2TAP0 167 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 PAQR9Q6ZVX9 377 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 ZNF677Q86XU0 584 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 ANKRD52Q8NB46 1076 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 EPS8L1Q8TE68 723 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 DNAJC7Q99615 494 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 ZSWIM1Q9BR11 485 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 IGFLR1Q9H665 355 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 DMAP1Q9NPF5 467 aaPredicted RBP16.12■□□□□ 0.17
SNIP1-202ENST00000468040 ACP6Q9NPH0 428 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 MAN1C1Q9NR34 630 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 DZANK1Q9NVP4 752 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 TSPAN16Q9UKR8 245 aa16.12■□□□□ 0.17
SNIP1-202ENST00000468040 BZW2Q9Y6E2 419 aaKnown RBP16.12■□□□□ 0.17
SNIP1-202ENST00000468040 CDH23Q9H251 3354 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms