RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.83■□□□□ 0.77
CHRNA4-203ENST00000467563 CCDC151A5D8V7 595 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 E5RJQ4 531 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 PIK3R2O00459 728 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 GABRDO14764 452 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 BRD3Q15059 726 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 CCDC142Q17RM4 750 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 ADAT2Q7Z6V5 191 aaKnown RBP19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 KLHL7Q8IXQ5 586 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 SLC35F5Q8WV83 523 aa19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 DDX27Q96GQ7 796 aaKnown RBP19.83■□□□□ 0.76
CHRNA4-203ENST00000467563 F8VP50 259 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 ATP2C2O75185 946 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 AARSP49588 968 aaKnown RBP eCLIP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 RGS7P49802 495 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 FAM189BP81408 668 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 PDE4CQ08493 712 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 BFSP2Q13515 415 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 CCDC70Q6NSX1 233 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 METTL5Q9NRN9 209 aaKnown RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 HESX1Q9UBX0 185 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 INPPL1O15357 1258 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 PQBP1O60828 265 aaKnown RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 SEC31AO94979 1220 aaKnown RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 EOMESO95936 686 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 FAM163BP0C2L3 166 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 TCF4P15884 667 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 ACAT1P24752 427 aaKnown RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 ADORA2BP29275 332 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 TIGD5Q53EQ6 642 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 SEL1L2Q5TEA6 688 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 CC2D1AQ6P1N0 951 aaPredicted RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 B3GALNT2Q8NCR0 500 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 IPO4Q8TEX9 1081 aaKnown RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 TNIP3Q96KP6 325 aa19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 DDX47Q9H0S4 455 aaKnown RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 TIMM13Q9Y5L4 95 aaPredicted RBP19.82■□□□□ 0.76
CHRNA4-203ENST00000467563 CCDC188H7C350 402 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 GABBR2O75899 941 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 TUBBP07437 444 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 TKTP29401 623 aaKnown RBP19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 MNX1P50219 401 aaPredicted RBP19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 ATN1P54259 1190 aaPredicted RBP19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 TUSC3Q13454 348 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 GLE1Q53GS7 698 aaKnown RBP19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 CLLU1OSQ5K130 101 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 KIAA0319Q5VV43 1072 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 CD300LGQ6UXG3 332 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 RHOT1Q8IXI2 618 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 ZDHHC14Q8IZN3 488 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 EMC1Q8N766 993 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 ANKRD52Q8NB46 1076 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 SLC2A14Q8TDB8 520 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 PIWIL1Q96J94 861 aaKnown RBP19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 NAP1L3Q99457 506 aaPredicted RBP19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 SLC4A5Q9BY07 1137 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 PLEKHA4Q9H4M7 779 aa19.81■□□□□ 0.76
CHRNA4-203ENST00000467563 PSTPIP1O43586 416 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 B3GAT3O94766 335 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 SETSIPP0DME0 302 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 HSPA6P17066 643 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 PIGHQ14442 188 aaPredicted RBP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 PAN2Q504Q3 1202 aaKnown RBP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 TMCO3Q6UWJ1 677 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 DSTYKQ6XUX3 929 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 FAM183BPQ6ZVS7 135 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 NIPA2Q8N8Q9 360 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 DBF4BQ8NFT6 615 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 STIM2Q9P246 746 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 TCRBV7S2A1N4TA0A589 114 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 I3L4J1 428 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 PITPNM1O00562 1244 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 SART1O43290 800 aaKnown RBP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 RAD51CO43502 376 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 SSR1P43307 286 aaKnown RBP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 FAM102AQ5T9C2 384 aaPredicted RBP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 TMEM110Q86TL2 294 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 FTHL17Q9BXU8 183 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 DDX43Q9NXZ2 648 aaKnown RBP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 LCMT1Q9UIC8 334 aa19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 TDRD15B5MCY1 1934 aaKnown RBP19.8■□□□□ 0.76
CHRNA4-203ENST00000467563 B4GALT3O60512 393 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 GLI1P08151 1106 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 PTPN1P18031 435 aaKnown RBP19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 BCAT1P54687 386 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 BST2Q10589 180 aaKnown RBP19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 LLGL1Q15334 1064 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 CLUL1Q15846 466 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 PLEKHG4Q58EX7 1191 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 OR6B2Q6IFH4 312 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 GLB1LQ6UWU2 654 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 SLC13A5Q86YT5 568 aaPredicted RBP19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 TMEM86AQ8N2M4 240 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 FNIP1Q8TF40 1166 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 STK32AQ8WU08 396 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 HNRNPLLQ8WVV9 542 aaKnown RBP19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 F8W810 466 aa19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 ZRANB2O95218 330 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHRNA4-203ENST00000467563 PSMA2P25787 234 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms