RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 PIPSLA2A3N6 862 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 GRID2IPA4D2P6 1211 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 TRIM43BA6NCK2 446 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 FFAR2O15552 330 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 SUV39H1O43463 412 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 PLA2G6O60733 806 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 SPDEFO95238 335 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 CSTBP04080 98 aaKnown RBP4.96□□□□□ -1.62
SMC4-208ENST00000467468 GNAI3P08754 354 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 ITGAMP11215 1152 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 FDXRP22570 491 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 TGM1P22735 817 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 PIK3CGP48736 1102 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 SOX8P57073 446 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 INHBEP58166 350 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 GNAI1P63096 354 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 TP53BP2Q13625 1128 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 ARL13BQ3SXY8 428 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 KLHDC7AQ5VTJ3 777 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 Q6ZPA2 131 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 ZNF365Q70YC5 407 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 VRK3Q8IV63 474 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 DCBLD1Q8N8Z6 715 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 ZNF527Q8NB42 609 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 ATP11CQ8NB49 1132 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 TRIM43Q96BQ3 446 aaPredicted RBP4.96□□□□□ -1.62
SMC4-208ENST00000467468 GCC1Q96CN9 775 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 MARS2Q96GW9 593 aaKnown RBP4.96□□□□□ -1.62
SMC4-208ENST00000467468 STK33Q9BYT3 514 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 TOR3AQ9H497 397 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 SERHLQ9NQF3 203 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 C9orf78Q9NZ63 289 aaPredicted RBP4.96□□□□□ -1.62
SMC4-208ENST00000467468 ZDHHC8Q9ULC8 765 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 GPR52Q9Y2T5 361 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 NEU2Q9Y3R4 380 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 PAXBP1Q9Y5B6 917 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 DMRT1Q9Y5R6 373 aa4.96□□□□□ -1.62
SMC4-208ENST00000467468 AATKQ6ZMQ8 1374 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 SKAP2O75563 359 aaPredicted RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 MATN4O95460 622 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 AHSGP02765 367 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 ANXA1P04083 346 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 ELANEP08246 267 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 KRT4P19013 534 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 FGFR2P21802 821 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 EEF1GP26641 437 aaKnown RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 ALDH9A1P49189 494 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 NOMO3P69849 1222 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 ZNF844Q08AG5 666 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 MAPRE1Q15691 268 aaKnown RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 ERCC6LQ2NKX8 1250 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 NOMO2Q5JPE7 1267 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 C3orf38Q5JPI3 329 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 B3GNTL1Q67FW5 361 aaPredicted RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 CLEC4GQ6UXB4 293 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 Q6YL49 198 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 MMS22LQ6ZRQ5 1243 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 CACNA2D3Q8IZS8 1091 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 FANCBQ8NB91 859 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 BEND2Q8NDZ0 799 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 OR6B3Q8NGW1 331 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 SLC9A6Q92581 669 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 MAML1Q92585 1016 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 P2RX7Q99572 595 aaKnown RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 C1orf43Q9BWL3 253 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 SMURF2Q9HAU4 748 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 SACM1LQ9NTJ5 587 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 TMEM74BQ9NUR3 256 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 RGS17Q9UGC6 210 aaPredicted RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 MAGED2Q9UNF1 606 aaPredicted RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 CEP83Q9Y592 693 aa4.95□□□□□ -1.62
SMC4-208ENST00000467468 POLR2AP24928 1970 aaKnown RBP4.95□□□□□ -1.62
SMC4-208ENST00000467468 MYADML2A6NDP7 307 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 GOLGA6L3A6NEY3 463 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 SLC43A1O75387 559 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 AGFG2O95081 481 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 PRSS23O95084 383 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 ANXA2P07355 339 aaKnown RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 SRGNP10124 158 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 EGR2P11161 476 aaPredicted RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 FCER1AP12319 257 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 HDCP19113 662 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 PDIA3P30101 505 aaKnown RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 RPS16P62249 146 aaKnown RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 PIGFQ07326 219 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 PPFIA1Q13136 1202 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 SMN1Q16637 294 aaKnown RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 CRB2Q5IJ48 1285 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 UTP14CQ5TAP6 766 aaKnown RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 ZNF783Q6ZMS7 281 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 ASB10Q8WXI3 467 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 TRIM63Q969Q1 353 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 ZNF566Q969W8 418 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 FUBP1Q96AE4 644 aaKnown RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 IQCDQ96DY2 449 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 LTV1Q96GA3 475 aaPredicted RBP4.94□□□□□ -1.62
SMC4-208ENST00000467468 TBATAQ96M53 351 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 RMDN3Q96TC7 470 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 TMEM120AQ9BXJ8 343 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 EIF2AQ9BY44 585 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms