RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 PATJQ8NI35 1801 aa12.99□□□□□ -0.33
HDLBP-231ENST00000467435 NLRC5Q86WI3 1866 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 SIGLEC16A6NMB1 481 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 E5RJQ4 531 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 KRIT1O00522 736 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 EOMESO95936 686 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 TUBBP07437 444 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 KRT3P12035 628 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 IGFBP6P24592 240 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-231ENST00000467435 ACAT1P24752 427 aaKnown RBP12.98□□□□□ -0.33
HDLBP-231ENST00000467435 AARSP49588 968 aaKnown RBP eCLIP12.98□□□□□ -0.33
HDLBP-231ENST00000467435 RGS7P49802 495 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 BCAT1P54687 386 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 OGDHQ02218 1023 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
HDLBP-231ENST00000467435 ZNF268Q14587 947 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-231ENST00000467435 BRD3Q15059 726 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 DAB2IPQ5VWQ8 1189 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 FAM183BPQ6ZVS7 135 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 RHOT1Q8IXI2 618 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 KLHL7Q8IXQ5 586 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 B3GALNT2Q8NCR0 500 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 JOSD2Q8TAC2 188 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 KRT12Q99456 494 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 PAAF1Q9BRP4 392 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 PLVAPQ9BX97 442 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 AP1M1Q9BXS5 423 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 DDX43Q9NXZ2 648 aaKnown RBP12.98□□□□□ -0.33
HDLBP-231ENST00000467435 PTPRDP23468 1912 aa12.98□□□□□ -0.33
HDLBP-231ENST00000467435 GOLGA6L10A0A0M3HER8 536 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 CCDC151A5D8V7 595 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 TULP2O00295 520 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 PIK3R2O00459 728 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 GABRDO14764 452 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 ODC1P11926 461 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 MCM3P25205 808 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 PSMA2P25787 234 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 TKTP29401 623 aaKnown RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 GJC1P36383 396 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 SSR1P43307 286 aaKnown RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 LHX1P48742 406 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 ATN1P54259 1190 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 TAS2R40P59535 323 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 VSNL1P62760 191 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 FAM189BP81408 668 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 PDE4CQ08493 712 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 PIGHQ14442 188 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 PAN2Q504Q3 1202 aaKnown RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 TIGD5Q53EQ6 642 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 GLE1Q53GS7 698 aaKnown RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 PLEKHG4Q58EX7 1191 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 FAM102AQ5T9C2 384 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 WDR93Q6P2C0 686 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 CTU1Q7Z7A3 348 aaKnown RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 NIPA2Q8N8Q9 360 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 SLC2A14Q8TDB8 520 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 FNIP1Q8TF40 1166 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 SEPT8Q92599 483 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 RUBCNQ92622 972 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 MCRS1Q96EZ8 462 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 SYT15Q9BQS2 421 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 LRRC1Q9BTT6 524 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
HDLBP-231ENST00000467435 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-231ENST00000467435 ERLIN1O75477 346 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 B3GAT3O94766 335 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 PYGMP11217 842 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 PTPN1P18031 435 aaKnown RBP12.96□□□□□ -0.33
HDLBP-231ENST00000467435 PAX3P23760 479 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-231ENST00000467435 BRCC3P46736 316 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-231ENST00000467435 SNX16P57768 344 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 GPNMBQ14956 572 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 TRIM60Q495X7 471 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 MDH1BQ5I0G3 518 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 NOMO2Q5JPE7 1267 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 PMF1Q6P1K2 205 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 TMCO3Q6UWJ1 677 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 SLC39A5Q6ZMH5 540 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 ADAT2Q7Z6V5 191 aaKnown RBP12.96□□□□□ -0.33
HDLBP-231ENST00000467435 METTL23Q86XA0 190 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 EMC1Q8N766 993 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 ANKRD52Q8NB46 1076 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 DBF4BQ8NFT6 615 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 SPATA18Q8TC71 538 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 HASPINQ8TF76 798 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 STK32AQ8WU08 396 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 APBB2Q92870 758 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 HNRNPABQ99729 332 aaKnown RBP12.96□□□□□ -0.33
HDLBP-231ENST00000467435 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 TMEM161AQ9NX61 479 aa12.96□□□□□ -0.33
HDLBP-231ENST00000467435 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms