RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 B3GALNT2Q8NCR0 500 aa9.98□□□□□ -0.81
PRPF3-202ENST00000467329 SLC35F5Q8WV83 523 aa9.98□□□□□ -0.81
PRPF3-202ENST00000467329 SUSD3Q96L08 255 aa9.98□□□□□ -0.81
PRPF3-202ENST00000467329 PLVAPQ9BX97 442 aa9.98□□□□□ -0.81
PRPF3-202ENST00000467329 HIPK3Q9H422 1215 aa9.98□□□□□ -0.81
PRPF3-202ENST00000467329 TBX21Q9UL17 535 aa9.98□□□□□ -0.81
PRPF3-202ENST00000467329 CDH9Q9ULB4 789 aa9.98□□□□□ -0.81
PRPF3-202ENST00000467329 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.98□□□□□ -0.81
PRPF3-202ENST00000467329 CASTOR2A6NHX0 329 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 ERBB2P04626 1255 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 PTPN1P18031 435 aaKnown RBP9.97□□□□□ -0.81
PRPF3-202ENST00000467329 MCM3P25205 808 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 AFF1P51825 1210 aaKnown RBP9.97□□□□□ -0.81
PRPF3-202ENST00000467329 RWDD2BP57060 319 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 FAAP100Q0VG06 881 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 CD300LGQ6UXG3 332 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 TTC30AQ86WT1 665 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 HSFY1Q96LI6 401 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 SYNCQ9H7C4 482 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 PCDHB8Q9UN66 801 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 POMCP01189 267 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 PLCB3Q01970 1234 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 TRIM60Q495X7 471 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 TIGD5Q53EQ6 642 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 DCAF12L1Q5VU92 463 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 DCUN1D2Q6PH85 259 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 ARCQ7LC44 396 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 NPAS4Q8IUM7 802 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 RHOT1Q8IXI2 618 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 NOA1Q8NC60 698 aaKnown RBP9.97□□□□□ -0.81
PRPF3-202ENST00000467329 C3orf58Q8NDZ4 430 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 ALG3Q92685 438 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 PSMB7Q99436 277 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 NCAPGQ9BPX3 1015 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 DPEP3Q9H4B8 488 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 CHORDC1Q9UHD1 332 aaPredicted RBP9.97□□□□□ -0.81
PRPF3-202ENST00000467329 INPP5FQ9Y2H2 1132 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 PCDHB7Q9Y5E2 793 aa9.97□□□□□ -0.81
PRPF3-202ENST00000467329 DPYSL4O14531 572 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 XPO1O14980 1071 aaKnown RBP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 H2AFXP16104 143 aaPredicted RBP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 LMO2P25791 158 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 PLA2G4AP47712 749 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 CTCFP49711 727 aaPredicted RBP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 TLE2Q04725 743 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 NAA30Q147X3 362 aaPredicted RBP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 SEL1L2Q5TEA6 688 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 COLGALT2Q8IYK4 626 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 KATNAL2Q8IYT4 538 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 CRIPAKQ8N1N5 446 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 C12orf29Q8N999 325 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 UBA3Q8TBC4 463 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 MS4A14Q96JA4 679 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 BTBD6Q96KE9 485 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 RNPC3Q96LT9 517 aaKnown RBP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 MCEEQ96PE7 176 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 SYT15Q9BQS2 421 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 MRPL9Q9BYD2 267 aaKnown RBP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 UBXN6Q9BZV1 441 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 C11orf49Q9H6J7 331 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 RAB21Q9UL25 225 aa9.96□□□□□ -0.81
PRPF3-202ENST00000467329 V9GYY5 206 aaPredicted RBP9.96□□□□□ -0.81
PRPF3-202ENST00000467329 PDGFRBP09619 1106 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 KRT3P12035 628 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 SLC8A3P57103 927 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 PDE4CQ08493 712 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 C2orf54Q08AI8 447 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 BRD3Q15059 726 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 CYP4A22Q5TCH4 519 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 LLGL2Q6P1M3 1020 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 WDR93Q6P2C0 686 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 POLNQ7Z5Q5 900 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 MAIP1Q8WWC4 291 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 KCTD13Q8WZ19 329 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 KRT35Q92764 455 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 ACBD6Q9BR61 282 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 TMEM175Q9BSA9 504 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 TRIM7Q9C029 511 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 FAM49BQ9NUQ9 324 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 TBC1D13Q9NVG8 400 aa9.96□□□□□ -0.82
PRPF3-202ENST00000467329 ARGLU1Q9NWB6 273 aaPredicted RBP9.96□□□□□ -0.82
PRPF3-202ENST00000467329 DDX43Q9NXZ2 648 aaKnown RBP9.96□□□□□ -0.82
PRPF3-202ENST00000467329 B3GAT3O94766 335 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 CCDC130P13994 396 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 DNA2P51530 1060 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 ZNF252P-AS1Q0IIN9 211 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 MAPRE1Q15691 268 aaKnown RBP9.95□□□□□ -0.82
PRPF3-202ENST00000467329 C2CD6Q53TS8 623 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 CNKSR3Q6P9H4 555 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 FUKQ8N0W3 1084 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 TSC1Q92574 1164 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 DUSP16Q9BY84 665 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 ANKZF1Q9H8Y5 726 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRPF3-202ENST00000467329 DDX56Q9NY93 547 aaKnown RBP9.95□□□□□ -0.82
PRPF3-202ENST00000467329 LRFN2Q9ULH4 789 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 GOLGA6L10A0A0M3HER8 536 aa9.95□□□□□ -0.82
PRPF3-202ENST00000467329 MYCP01106 439 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms