RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 LPXNO60711 386 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 CIB2O75838 187 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 SERPINB2P05120 415 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 CALB1P05937 261 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 ITGB5P18084 799 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 MMP8P22894 467 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 TBXAS1P24557 533 aaPredicted RBP16.32■□□□□ 0.2
CHD1L-205ENST00000467213 CDKN2BP42772 138 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 MFSD7Q6UXD7 560 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 SLC44A1Q8WWI5 657 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 CCDC127Q96BQ5 260 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 FRMD8Q9BZ67 464 aaPredicted RBP16.32■□□□□ 0.2
CHD1L-205ENST00000467213 ZNF180Q9UJW8 692 aa16.32■□□□□ 0.2
CHD1L-205ENST00000467213 MT-ND3P03897 115 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 PABPC4LP0CB38 370 aaKnown RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 GSTT1P30711 240 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SESN3P58005 492 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 THOC5Q13769 683 aaKnown RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 TFDP1Q14186 410 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 GRM2Q14416 872 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SLC30A10Q6XR72 485 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 C3orf62Q6ZUJ4 267 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 PHLDB2Q86SQ0 1253 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SCUBE1Q8IWY4 988 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 KBTBD2Q8IY47 623 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 CPT1BQ92523 772 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 EZH1Q92800 747 aaPredicted RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 KCNH7Q9NS40 1196 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SIP14410 1827 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 AP1G1O43747 822 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 KRT1P04264 644 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 ZSCAN5DPP0CG00 497 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SFNP31947 248 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 NPTX2P47972 431 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SCNN1DP51172 638 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 JAK3P52333 1124 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 PSMC5P62195 406 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 LIN52Q52LA3 116 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 PLA2G4FQ68DD2 849 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SLC39A4Q6P5W5 647 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 PODNQ7Z5L7 613 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 STN1Q9H668 368 aaKnown RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 PCMTD2Q9NV79 361 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 SLC17A7Q9P2U7 560 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 TAGLN3Q9UI15 199 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
CHD1L-205ENST00000467213 ASTN2O75129 1339 aaPredicted RBP16.31■□□□□ 0.2
CHD1L-205ENST00000467213 MYH9P35579 1960 aaKnown RBP16.3■□□□□ 0.2
CHD1L-205ENST00000467213 C4BPAP04003 597 aaKnown RBP16.3■□□□□ 0.2
CHD1L-205ENST00000467213 POLE2P56282 527 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 LRRC6Q86X45 466 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 EPAS1Q99814 870 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 C11orf70Q9BRQ4 267 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 WWP1Q9H0M0 922 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 NDE1Q9NXR1 346 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 HERC5Q9UII4 1024 aaKnown RBP16.3■□□□□ 0.2
CHD1L-205ENST00000467213 TMCO1Q9UM00 188 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 WDR81Q562E7 1941 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 UPP2O95045 317 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 LSAMPQ13449 338 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 ATG16L1Q676U5 607 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 ALDH16A1Q8IZ83 802 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 SERPINA10Q9UK55 444 aa16.3■□□□□ 0.2
CHD1L-205ENST00000467213 THSD7AQ9UPZ6 1657 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 SMIM31A0A1B0GVY4 71 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 EIF4E1BA6NMX2 242 aaKnown RBP16.29■□□□□ 0.2
CHD1L-205ENST00000467213 EXTL3O43909 919 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 ZNF132P52740 706 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 CUL2Q13617 745 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 CNPY1Q3B7I2 92 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 PDIK1LQ8N165 341 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 FAM81AQ8TBF8 368 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 TOPORSQ9NS56 1045 aaPredicted RBP16.29■□□□□ 0.2
CHD1L-205ENST00000467213 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 MYL2P10916 166 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 CCNFP41002 786 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 SERPINB4P48594 390 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
CHD1L-205ENST00000467213 OVGP1Q12889 678 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 ITGA9Q13797 1035 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 BBS12Q6ZW61 710 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 THNSL1Q8IYQ7 743 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 ST13P4Q8IZP2 240 aaPredicted RBP16.29■□□□□ 0.2
CHD1L-205ENST00000467213 NME8Q8N427 588 aa16.29■□□□□ 0.2
CHD1L-205ENST00000467213 WDR83Q9BRX9 315 aaKnown RBP16.29■□□□□ 0.2
CHD1L-205ENST00000467213 FBXO6Q9NRD1 293 aaPredicted RBP16.29■□□□□ 0.2
CHD1L-205ENST00000467213 C3orf70A6NLC5 250 aaPredicted RBP16.28■□□□□ 0.2
CHD1L-205ENST00000467213 B2RBV5 119 aa16.28■□□□□ 0.2
CHD1L-205ENST00000467213 BUD23O43709 281 aaKnown RBP16.28■□□□□ 0.2
CHD1L-205ENST00000467213 GH2P01242 217 aa16.28■□□□□ 0.2
CHD1L-205ENST00000467213 KRT10P13645 584 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms