RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ISCA1Q9BUE6 129 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 ZSCAN32Q9NX65 697 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 NPEPPSL1A6NEC2 478 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 CAPN14A8MX76 684 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 TOR1BO14657 336 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 FOXS1O43638 330 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 RRP9O43818 475 aaKnown RBP4.82□□□□□ -1.64
VPS13A-209ENST00000467124 SRGAP2O75044 1071 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 PIAS2O75928 621 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 SPATA31D3P0C874 917 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 NTSR1P30989 418 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 GCLCP48506 637 aaPredicted RBP4.82□□□□□ -1.64
VPS13A-209ENST00000467124 COPAP53621 1224 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 PRKAG1P54619 331 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 ZNF844Q08AG5 666 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 PTK2BQ14289 1009 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 NPY5RQ15761 445 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 TAF12Q16514 161 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.82□□□□□ -1.64
VPS13A-209ENST00000467124 METRNLQ641Q3 311 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 NAIF1Q69YI7 327 aaPredicted RBP4.82□□□□□ -1.64
VPS13A-209ENST00000467124 TCTN3Q6NUS6 607 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 TMEM108Q6UXF1 575 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 Q6ZRM9 215 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 KIAA0408Q6ZU52 694 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 SPATA31D4Q6ZUB0 917 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 RRAGAQ7L523 313 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 LIMS2Q7Z4I7 341 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 SGMS1Q86VZ5 419 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 OR56A1Q8NGH5 318 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 CYP2W1Q8TAV3 490 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 DNAJB14Q8TBM8 379 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 FAM71BQ8TC56 605 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 BPIFB1Q8TDL5 484 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 ZNF483Q8TF39 744 aaPredicted RBP4.82□□□□□ -1.64
VPS13A-209ENST00000467124 NUP133Q8WUM0 1156 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 PPP2R3CQ969Q6 453 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 UBXN10Q96LJ8 280 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 NELL2Q99435 816 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 MESP1Q9BRJ9 268 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 REXO4Q9GZR2 422 aaKnown RBP4.82□□□□□ -1.64
VPS13A-209ENST00000467124 TM7SF3Q9NS93 570 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 PPP4R1LQ9P1A2 415 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 CNOT11Q9UKZ1 510 aaKnown RBP4.82□□□□□ -1.64
VPS13A-209ENST00000467124 HPSEQ9Y251 543 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 RAD54BQ9Y620 910 aa4.82□□□□□ -1.64
VPS13A-209ENST00000467124 DNPH1O43598 174 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ERN1O75460 977 aaKnown RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 POLBP06746 335 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 SRGAP2BP0DMP2 458 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 HGFP14210 728 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 JUPP14923 745 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 FGFR4P22455 802 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 KLRK1P26718 216 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 AKT1P31749 480 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 VIPR2P41587 438 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 TCF15Q12870 199 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 CD300EQ496F6 205 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 TBC1D10BQ4KMP7 808 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 C1QL3Q5VWW1 255 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 SPTY2D1Q68D10 685 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 GLB1LQ6UWU2 654 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 MOGAT3Q86VF5 341 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ANKRD18AQ8IVF6 992 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 GALNT15Q8N3T1 639 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ZNF808Q8N4W9 903 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 CPT1CQ8TCG5 803 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 FAM89AQ96GI7 184 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ZBTB45Q96K62 511 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ZSCAN31Q96LW9 406 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 CXorf36Q9H7Y0 433 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 GGA3Q9NZ52 723 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 IFT80Q9P2H3 777 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ZFR2Q9UPR6 939 aaKnown RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 MAP3K2Q9Y2U5 619 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 MTO1Q9Y2Z2 717 aaKnown RBP4.81□□□□□ -1.64
VPS13A-209ENST00000467124 HS3ST4Q9Y661 456 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 CDY1Q9Y6F8 540 aa4.81□□□□□ -1.64
VPS13A-209ENST00000467124 ADAMTS20P59510 1910 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 A0A0B4J269 797 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 CCDC195A0A1B0GUA6 201 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 GOLGA6L6A8MZA4 724 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PATE3B3GLJ2 98 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 B9A039 149 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 DIRC3C9JPN6 131 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 HSD3B1P14060 373 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 IDEP14735 1019 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 BMP7P18075 431 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 COMTP21964 271 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 GCSHP23434 173 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 ADORA2AP29274 412 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PXNP49023 591 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PRKAA2P54646 552 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PIGFQ07326 219 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 MYO1EQ12965 1108 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 INSCQ1MX18 579 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 MGAT5BQ3V5L5 792 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PREPLQ4J6C6 727 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PDCD4Q53EL6 469 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms