RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 COL19A1Q14993 1142 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 CNGA2Q16280 664 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 SGO2Q562F6 1265 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 TCEAL5Q5H9L2 206 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 VSTM1Q6UX27 236 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 TMEM184AQ6ZMB5 413 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 TMC6Q7Z403 805 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 ZNF677Q86XU0 584 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 SPATA2LQ8IUW3 424 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-205ENST00000466897 FUKQ8N0W3 1084 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 EFHBQ8N7U6 833 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 C12orf29Q8N999 325 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 CYFIP2Q96F07 1278 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 HEXIM2Q96MH2 286 aaKnown RBP16.13■□□□□ 0.17
NPHP4-205ENST00000466897 GUCD1Q96NT3 240 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 CDX2Q99626 313 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-205ENST00000466897 B3GNT5Q9BYG0 378 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 MTMR10Q9NXD2 777 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 IMPACTQ9P2X3 320 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 HCFC2Q9Y5Z7 792 aa16.13■□□□□ 0.17
NPHP4-205ENST00000466897 O00370 1275 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 CSPG5O95196 566 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 PNMA6AP0CW24 399 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-205ENST00000466897 CYP11B1P15538 503 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 HOXA9P31269 272 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 CASP14P31944 242 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 USP8P40818 1118 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 PRKCIP41743 596 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 NRIP1P48552 1158 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 TUFMP49411 452 aaKnown RBP16.12■□□□□ 0.17
NPHP4-205ENST00000466897 PDE6CP51160 858 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 ARPP19P56211 112 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 ADCY1Q08828 1119 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 HYAL1Q12794 435 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 SFMBT2Q5VUG0 894 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 LCLAT1Q6UWP7 414 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 CCDC149Q6ZUS6 474 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 PAQR9Q6ZVX9 377 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 Q7L0L9 218 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 FAM35AQ86V20 835 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 SLC47A2Q86VL8 602 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 GLYCTKQ8IVS8 523 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 EPS8L1Q8TE68 723 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 ZNF606Q8WXB4 792 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 SMARCD1Q96GM5 515 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 FAM161BQ96MY7 647 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 DNAJC7Q99615 494 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 CSNK1G1Q9HCP0 422 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.12■□□□□ 0.17
NPHP4-205ENST00000466897 REV3LO60673 3130 aa16.12■□□□□ 0.17
NPHP4-205ENST00000466897 MFAP3LO75121 409 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 GFPT2O94808 682 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 POU2F2P09086 479 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 SRGAP2BP0DMP2 458 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 HAPLN1P10915 354 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-205ENST00000466897 CD19P15391 556 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 ELF1P32519 619 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 KRT9P35527 623 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 CYP27A1Q02318 531 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 CCDC142Q17RM4 750 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 PPP1R26Q5T8A7 1209 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-205ENST00000466897 IRF2BP2Q7Z5L9 587 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 PALB2Q86YC2 1186 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 DRC7Q8IY82 874 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 ATAD1Q8NBU5 361 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 KREMEN2Q8NCW0 462 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 SLC2A14Q8TDB8 520 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 TFAP2BQ92481 460 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 DDX1Q92499 740 aaKnown RBP16.11■□□□□ 0.17
NPHP4-205ENST00000466897 CASP10Q92851 521 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 PGLYRP2Q96PD5 576 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 ZSWIM1Q9BR11 485 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 PNPLA8Q9NP80 782 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 FAM49BQ9NUQ9 324 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 DZANK1Q9NVP4 752 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-205ENST00000466897 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
NPHP4-205ENST00000466897 DENND4CQ5VZ89 1909 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 C2orf16Q68DN1 1984 aa16.11■□□□□ 0.17
NPHP4-205ENST00000466897 OBSL1O75147 1896 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 TRIM66O15016 1216 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 PER2O15055 1255 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 THAP12O43422 761 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 FAM200BP0CF97 657 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 CCDC130P13994 396 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 IGFBP4P22692 258 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
NPHP4-205ENST00000466897 BCAT1P54687 386 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 DUSP4Q13115 394 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 PLD1Q13393 1074 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 ASIC2Q16515 512 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 CTC1Q2NKJ3 1217 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 PKDCCQ504Y2 493 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 LIN9Q5TKA1 542 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 RBM23Q86U06 439 aaKnown RBP16.1■□□□□ 0.17
NPHP4-205ENST00000466897 ANKRD52Q8NB46 1076 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 OR8K1Q8NGG5 319 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms