RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RBBP8Q99708 897 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 MOV10L1Q9BXT6 1211 aaKnown RBP9.07□□□□□ -0.96
HPS4-209ENST00000466781 TMEM245Q9H330 911 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 KCND2Q9NZV8 630 aa9.07□□□□□ -0.96
HPS4-209ENST00000466781 PHF2O75151 1096 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 TOMM70O94826 608 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 STX3Q13277 289 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 RABGAP1LQ5R372 815 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 TTC39BQ5VTQ0 682 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 CARNMT1Q8N4J0 409 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 MRPS31Q92665 395 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 CMTM5Q96DZ9 223 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 CDCA5Q96FF9 252 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 VPS50Q96JG6 964 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 RNPC3Q96LT9 517 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 AGBL1Q96MI9 1066 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 METTL5Q9NRN9 209 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 PAK5Q9P286 719 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 UVRAGQ9P2Y5 699 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 TRMT6Q9UJA5 497 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 FAM205CA6NFA0 338 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 GRAP2O75791 330 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 MYBP10242 640 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 SLC2A3P11169 496 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 ENO3P13929 434 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 PGM1P36871 562 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 RUNX1T1Q06455 604 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 CDC16Q13042 620 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 CYTH1Q15438 398 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 CCDC60Q8IWA6 550 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 TMEM117Q9H0C3 514 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 EPB41L4AQ9HCS5 686 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 PRG3Q9Y2Y8 225 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 C2orf81A6NN90 581 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 ZW10O43264 779 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 NR3C2P08235 984 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 KRT20P35900 424 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 PPP4CP60510 307 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 FKBP1AP62942 108 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 ZNF200P98182 395 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 BFSP2Q13515 415 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 UBA3Q8TBC4 463 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 L3MBTL3Q96JM7 780 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 GEMIN8Q9NWZ8 242 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 BLOC1S6Q9UL45 172 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 EXTL3O43909 919 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 SOAT2O75908 522 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 URODP06132 367 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 PDHBP11177 359 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 PYGMP11217 842 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 HPGDP15428 266 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 MRPS15P82914 257 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 DDR1Q08345 913 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 CNGA3Q16281 694 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 ALFQ53S48 1182 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 CHADLQ6NUI6 762 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 LINC00523Q86TU6 105 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 NLRP14Q86W24 1093 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 PHACTR4Q8IZ21 702 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 SCN3BQ9NY72 215 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 PSMC3IPQ9P2W1 217 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 GTF2A1LQ9UNN4 478 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 SMG5Q9UPR3 1016 aaKnown RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 DYRK1BQ9Y463 629 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 FOXN1O15353 648 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 RASSF9O75901 435 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 RFX5P48382 616 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 BTKQ06187 659 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 PDIA5Q14554 519 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 AASDHQ4L235 1098 aaPredicted RBP9.06□□□□□ -0.96
HPS4-209ENST00000466781 IYDQ6PHW0 289 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 HERC6Q8IVU3 1022 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 LRRC71Q8N4P6 559 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 ARMC2Q8NEN0 867 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 BHMTQ93088 406 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 HPS3Q969F9 1004 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 STK33Q9BYT3 514 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 CHST12Q9NRB3 414 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 MRGBPQ9NV56 204 aa9.06□□□□□ -0.96
HPS4-209ENST00000466781 ICAM1P05362 532 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 GRK3P35626 688 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 RAD23BP54727 409 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 ATP2C1P98194 919 aaPredicted RBP9.05□□□□□ -0.96
HPS4-209ENST00000466781 KDSRQ06136 332 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 NAPEPLDQ6IQ20 393 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 AKT1S1Q96B36 256 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 PRMT1Q99873 361 aaKnown RBP9.05□□□□□ -0.96
HPS4-209ENST00000466781 ETNK1Q9HBU6 452 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 NMRK2Q9NPI5 230 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 ITIH6Q6UXX5 1313 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 E2F8A0AVK6 867 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 MTSS1O43312 755 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 CKBP12277 381 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 AMPD2Q01433 879 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 DPYDQ12882 1025 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 PLA2G4FQ68DD2 849 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 LVRNQ6Q4G3 990 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 C4orf22Q6V702 233 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 FGD2Q7Z6J4 655 aa9.05□□□□□ -0.96
HPS4-209ENST00000466781 PCSK9Q8NBP7 692 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms