RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 MYO1CO00159 1063 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 WT1P19544 449 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 ITPKBP27987 946 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 PCSK6P29122 969 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 PPIFP30405 207 aaKnown RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 WNT3P56703 355 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 SP2Q02086 613 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 CTBP1Q13363 440 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 LLGL1Q15334 1064 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 CNN3Q15417 329 aaKnown RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 LMBRD2Q68DH5 695 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 SYCE2Q6PIF2 218 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 MYO1HQ8N1T3 1032 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 SLC15A4Q8N697 577 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 OR6B3Q8NGW1 331 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 ZNF384Q8TF68 577 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 ATRIPQ8WXE1 791 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 TSR2Q969E8 191 aaKnown RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 HAPLN3Q96S86 360 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 C22orf23Q9BZE7 217 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 DPH1Q9BZG8 443 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 DDX20Q9UHI6 824 aaKnown RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 NDRG4Q9ULP0 352 aaKnown RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 L1RE1Q9UN81 338 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 GCOM1H8Y6P7 765 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-203ENST00000466732 hCG_1984214I3L0E3 225 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 TBC1D4O60343 1298 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 PROP1O75360 226 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 NXPH3O95157 252 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 C1RP00736 705 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 CYP2C9P11712 490 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 EN2P19622 333 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-203ENST00000466732 GPD1P21695 349 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 CD38P28907 300 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 LRPAP1P30533 357 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 SLC7A1P30825 629 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 NHLH1Q02575 133 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 E2F2Q14209 437 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 FAM153CQ494X1 144 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 PLAC9Q5JTB6 97 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 ZNF618Q5T7W0 954 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 TEDDM1Q5T9Z0 273 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 RGS7BPQ6MZT1 257 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-203ENST00000466732 ZNF551Q7Z340 670 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-203ENST00000466732 MAVSQ7Z434 540 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 ZNF280BQ86YH2 543 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 RASAL3Q86YV0 1011 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 ATG4AQ8WYN0 398 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 ANKS1AQ92625 1134 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 SARAFQ96BY9 339 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 PUS7Q96PZ0 661 aaKnown RBP4.86□□□□□ -1.63
VPS13D-203ENST00000466732 MESP1Q9BRJ9 268 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 SMURF2Q9HAU4 748 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 ARHGEF3Q9NR81 526 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 SERTAD4Q9NUC0 356 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 ADAM21Q9UKJ8 722 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 MRPS17Q9Y2R5 130 aaKnown RBP4.86□□□□□ -1.63
VPS13D-203ENST00000466732 USP19O94966 1318 aa4.86□□□□□ -1.63
VPS13D-203ENST00000466732 CFAP69A5D8W1 941 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 MYO1FO00160 1098 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 MASP2O00187 686 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 TBX3O15119 743 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 SLC16A3O15427 465 aaKnown RBP4.85□□□□□ -1.63
VPS13D-203ENST00000466732 MARCH6O60337 910 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 TLR5O60602 858 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 EBLN1P0CF75 366 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 XRCC6P12956 609 aaKnown RBP eCLIP4.85□□□□□ -1.63
VPS13D-203ENST00000466732 JUPP14923 745 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 LIPAP38571 399 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 CCT8P50990 548 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 CLCN2P51788 898 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 SOX10P56693 466 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 C21orf58P58505 322 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 SATB1Q01826 763 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 MYO1EQ12965 1108 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 SLC13A2Q13183 592 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 APOA5Q6Q788 366 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 AMIGO2Q86SJ2 522 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 GAS2L3Q86XJ1 694 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 MAML1Q92585 1016 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 FAM204AQ9H8W3 233 aa4.85□□□□□ -1.63
VPS13D-203ENST00000466732 VSTM5A8MXK1 200 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 TMEM233B4DJY2 109 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 ERBB2P04626 1255 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 DRD4P21917 467 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 ALDH9A1P49189 494 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 SUMO3P55854 103 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-203ENST00000466732 RAB32Q13637 225 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 CCDC142Q17RM4 750 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 ZIK1Q3SY52 487 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-203ENST00000466732 MGAT5BQ3V5L5 792 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 TREML2Q5T2D2 321 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 MPP5Q8N3R9 675 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 GLG1Q92896 1179 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 SUCLG2Q96I99 432 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 MS4A7Q9GZW8 240 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-203ENST00000466732 CXorf36Q9H7Y0 433 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 KLHL42Q9P2K6 505 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 CPNE7Q9UBL6 633 aa4.84□□□□□ -1.63
VPS13D-203ENST00000466732 TPCN1Q9ULQ1 816 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms