RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 MRPL42Q9Y6G3 142 aaKnown RBP12.85□□□□□ -0.35
VPS16-206ENST00000466415 SCINQ9Y6U3 715 aa12.85□□□□□ -0.35
VPS16-206ENST00000466415 H7C4K7 107 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 ATP2C2O75185 946 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 FAM200BP0CF97 657 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 PPM1AP35813 382 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 ETF1P62495 437 aaKnown RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 BST2Q10589 180 aaKnown RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 PDCLQ13371 301 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 DCP1BQ8IZD4 617 aaKnown RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 TNS4Q8IZW8 715 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 SLC35F6Q8N357 371 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 COLGALT1Q8NBJ5 622 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 TRIM58Q8NG06 486 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 PHOSPHO2Q8TCD6 241 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 MYLPFQ96A32 169 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 ARHGEF26Q96DR7 871 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 VCPIP1Q96JH7 1222 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 CALR3Q96L12 384 aaKnown RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 HNRNPABQ99729 332 aaKnown RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 LPIN3Q9BQK8 851 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 CXXC1Q9P0U4 656 aaPredicted RBP12.84□□□□□ -0.35
VPS16-206ENST00000466415 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
VPS16-206ENST00000466415 COL4A6Q14031 1691 aa12.83□□□□□ -0.35
VPS16-206ENST00000466415 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 OR6C75A6NL08 312 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 TLL1O43897 1013 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 ABL1P00519 1130 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 CYP1A2P05177 515 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 FGFR3P22607 806 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 MMP8P22894 467 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 CASQ1P31415 396 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 PLCB3Q01970 1234 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 USP41Q3LFD5 358 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 KIAA1841Q6NSI8 718 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 DNAJC24Q6P3W2 148 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 C4orf50Q6ZRC1 276 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 FAM35AQ86V20 835 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 TTC30AQ86WT1 665 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.36
VPS16-206ENST00000466415 SPATA2LQ8IUW3 424 aaPredicted RBP12.83□□□□□ -0.36
VPS16-206ENST00000466415 HERC6Q8IVU3 1022 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 ZNF564Q8TBZ8 553 aaPredicted RBP12.83□□□□□ -0.36
VPS16-206ENST00000466415 IGSF21Q96ID5 467 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 RTP3Q9BQQ7 232 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 TTPALQ9BTX7 342 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 NUP85Q9BW27 656 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
VPS16-206ENST00000466415 GPR62Q9BZJ7 368 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 MRPL47Q9HD33 250 aaKnown RBP12.83□□□□□ -0.36
VPS16-206ENST00000466415 RRAGDQ9NQL2 400 aaPredicted RBP12.83□□□□□ -0.36
VPS16-206ENST00000466415 AVENQ9NQS1 362 aaPredicted RBP12.83□□□□□ -0.36
VPS16-206ENST00000466415 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 SPG21Q9NZD8 308 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 UVRAGQ9P2Y5 699 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 PCDHB12Q9Y5F1 795 aa12.83□□□□□ -0.36
VPS16-206ENST00000466415 CLDN5O00501 218 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 CAPN15O75808 1086 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 AP1G2O75843 785 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 OAZ2O95190 189 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 CPB1P15086 417 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 NPR3P17342 541 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 RRM1P23921 792 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 GPD2P43304 727 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 RGS7P49802 495 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
VPS16-206ENST00000466415 PDE4CQ08493 712 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 PTPN20Q4JDL3 420 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 C2CD6Q53TS8 623 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 CYP4A22Q5TCH4 519 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 KIAA0319Q5VV43 1072 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 PHLDB2Q86SQ0 1253 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 SYCE1Q8N0S2 351 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 SLC39A11Q8N1S5 342 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 WDTC1Q8N5D0 677 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 OR10T2Q8NGX3 314 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 KIF18AQ8NI77 898 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 SLC35G2Q8TBE7 412 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 BCL7CQ8WUZ0 217 aaPredicted RBP12.82□□□□□ -0.36
VPS16-206ENST00000466415 C18orf8Q96DM3 657 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 SMARCD1Q96GM5 515 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 PCED1BQ96HM7 432 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
VPS16-206ENST00000466415 RAD9AQ99638 391 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 SELENOOQ9BVL4 669 aa12.82□□□□□ -0.36
VPS16-206ENST00000466415 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms