RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SYNCQ9H7C4 482 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 TSPAN16Q9UKR8 245 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 ST3GAL5Q9UNP4 418 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 PODXLO00592 558 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 SPTLC1O15269 473 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 RPS6KA5O75582 802 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 KRT3P12035 628 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 GSCP56915 257 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-205ENST00000466192 DHX9Q08211 1270 aaKnown RBP19.27■□□□□ 0.68
COL9A3-205ENST00000466192 SNX1Q13596 522 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 DEFB115Q30KQ5 88 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 ATP13A4Q4VNC1 1196 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 FBXO47Q5MNV8 452 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 ANKS1BQ7Z6G8 1248 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 ACOT1Q86TX2 421 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 RSPH3Q86UC2 560 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 C12orf50Q8NA57 414 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-205ENST00000466192 FAM76AQ8TAV0 307 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 UBLCP1Q8WVY7 318 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-205ENST00000466192 LRRC19Q9H756 370 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 ZDHHC18Q9NUE0 388 aa19.27■□□□□ 0.68
COL9A3-205ENST00000466192 RALAP11233 206 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 ATF7P17544 494 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 RPL21P46778 160 aaKnown RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 GABRB2P47870 512 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 FNTAP49354 379 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 DRG2P55039 364 aaKnown RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 NFX1Q12986 1120 aaKnown RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 PIGHQ14442 188 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 PPP1R26Q5T8A7 1209 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 KCTD16Q68DU8 428 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 NIPA2Q8N8Q9 360 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 ATG4AQ8WYN0 398 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 TSPAN18Q96SJ8 248 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 LCMT1Q9UIC8 334 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 MEIS3P2A8K0S8 358 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 XPOTO43592 962 aaKnown RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 PFKMP08237 780 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 MGAT3Q09327 533 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 ZNF268Q14587 947 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 EXD1Q8NHP7 514 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 FBXO25Q8TCJ0 367 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 ZFP42Q96MM3 310 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 OSBPL7Q9BZF2 842 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 METTL5Q9NRN9 209 aaKnown RBP19.26■□□□□ 0.67
COL9A3-205ENST00000466192 CHST7Q9NS84 486 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 KLHL11Q9NVR0 708 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 WDR35Q9P2L0 1181 aa19.26■□□□□ 0.67
COL9A3-205ENST00000466192 KPNA7A9QM74 516 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 PTGESO14684 152 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 HCRTO43612 131 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 TOMM70O94826 608 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 CAPN2P17655 700 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 KLF1Q13351 362 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-205ENST00000466192 GOLGA7BQ2TAP0 167 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 CEP85LQ5SZL2 805 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 TXNRD3NBQ6F5E7 133 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 OR6B3Q8NGW1 331 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 OR2W6PQ8NHA6 318 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 MCRS1Q96EZ8 462 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 RUNDC3BQ96NL0 473 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 GRHL1Q9NZI5 618 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 ATP8A1Q9Y2Q0 1164 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 ECEL1O95672 775 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 ZFYVE27Q5T4F4 411 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 ZDHHC24Q6UX98 284 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 RPAINQ86UA6 219 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 EMC1Q8N766 993 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 KBTBD7Q8WVZ9 684 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 ZNF560Q96MR9 790 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 LPIN3Q9BQK8 851 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 DPEP3Q9H4B8 488 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 FAM49BQ9NUQ9 324 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 GDAP2Q9NXN4 497 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 CALCOCO1Q9P1Z2 691 aa19.25■□□□□ 0.67
COL9A3-205ENST00000466192 FGFR1P11362 822 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 PSMA2P25787 234 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-205ENST00000466192 PPP1R7Q15435 360 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 DNAJC21Q5F1R6 531 aaKnown RBP19.24■□□□□ 0.67
COL9A3-205ENST00000466192 ZNF618Q5T7W0 954 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 LRRC38Q5VT99 294 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 UNC93AQ86WB7 457 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 TTC30AQ86WT1 665 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 SH2D3CQ8N5H7 860 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 ARFGAP1Q8N6T3 406 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 MAIP1Q8WWC4 291 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 RNF25Q96BH1 459 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-205ENST00000466192 OSBPL8Q9BZF1 889 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 AGO3Q9H9G7 860 aaKnown RBP19.24■□□□□ 0.67
COL9A3-205ENST00000466192 FAM105AQ9NUU6 356 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 SRRDQ9UH36 339 aa19.24■□□□□ 0.67
COL9A3-205ENST00000466192 R3HDM2Q9Y2K5 976 aaKnown RBP19.24■□□□□ 0.67
COL9A3-205ENST00000466192 PI4K2BG5E9Z4 385 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 H0YGN5 161 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 PIK3R2O00459 728 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 TRPA1O75762 1119 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 PNPLA4P41247 253 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 TAF6P49848 677 aa19.23■□□□□ 0.67
COL9A3-205ENST00000466192 MTMR3Q13615 1198 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms