RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 XRRA1Q6P2D8 792 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 KCNV1Q6PIU1 500 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 ABHD15Q6UXT9 468 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 CD300LDQ6UXZ3 194 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 CEP68Q76N32 757 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 OTOP2Q7RTS6 562 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 TMCO2Q7Z6W1 182 aaPredicted RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 DEFB128Q7Z7B8 93 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 STK32CQ86UX6 486 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SESTD1Q86VW0 696 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 ZNF227Q86WZ6 799 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 PLA2G4DQ86XP0 818 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 CCDC60Q8IWA6 550 aaPredicted RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 CCDC83Q8IWF9 413 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 BLIDQ8IZY5 108 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 Q8N1Y9 231 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 TBCKQ8TEA7 893 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 TRAPPC12Q8WVT3 735 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 DIO2Q92813 273 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 C22orf23Q9BZE7 217 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 TTYH1Q9H313 450 aaPredicted RBP5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 CAPN10Q9HC96 672 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 C6orf50Q9HD87 102 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 IL23AQ9NPF7 189 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SH3GLB2Q9NR46 395 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 SLC9A2Q9UBY0 812 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 FBXL7Q9UJT9 491 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 XIRP2A4UGR9 3374 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 STK36Q9NRP7 1315 aa5.43□□□□□ -1.54
EXOSC3-204ENST00000465860 A0A0C4DFX4 3053 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 KIAA1671Q9BY89 1806 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 IGKV6D-21A0A0A0MT36 114 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 IPO5O00410 1097 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 SUSD5O60279 629 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 NBNO60934 754 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 SCG5P05408 212 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 SNRPB2P08579 225 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 IQCF3P0C7M6 154 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 CKBP12277 381 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 MYOGP15173 224 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 RPL13P26373 211 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 GNA11P29992 359 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 CIITAP33076 1130 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 BCL6P41182 706 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 AKAP17AQ02040 695 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 GUCY1B3Q02153 619 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 PLCB4Q15147 1175 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 UGCGQ16739 394 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 PRSS53Q2L4Q9 553 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 PRR16Q569H4 304 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 BRDTQ58F21 947 aaPredicted RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 MROH9Q5TGP6 573 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 MRM1Q6IN84 353 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 MILR1Q7Z6M3 343 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 SERINC5Q86VE9 423 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 C7orf31Q8N865 590 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 KYQ8NBH2 561 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 MICAL1Q8TDZ2 1067 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 LMBR1Q8WVP7 490 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 SEPT1Q8WYJ6 367 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 RNPC3Q96LT9 517 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 ORC3Q9UBD5 711 aaPredicted RBP5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 X6R8D5 127 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 COL4A6Q14031 1691 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 NLRC5Q86WI3 1866 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 NFASCO94856 1347 aa5.42□□□□□ -1.54
EXOSC3-204ENST00000465860 COL4A4P53420 1690 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 CYP3A7-CYP3A51PA0A087WV96 503 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 C17orf102A2RUQ5 167 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 TMEM150BA6NC51 233 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 BTBD18B2RXH4 712 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 KIF28PB7ZC32 967 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 K7ESM1 405 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 MAFGO15525 162 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 MEFVO15553 781 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 PSMD10O75832 226 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 SUPT20HL2P0C7V6 817 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 INSRRP14616 1297 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 CYP3A7P24462 503 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 ETFBP38117 255 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 STAT5AP42229 794 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 RABGGTBP53611 331 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 ITGA1P56199 1179 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 IGBP1P78318 339 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 DEFB103AP81534 67 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 RBL2Q08999 1139 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 KCNAB2Q13303 367 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 PPIGQ13427 754 aaKnown RBP eCLIP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 ANKRD1Q15327 319 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 KRT40Q6A162 431 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 DENND5AQ6IQ26 1287 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 SWSAP1Q6NVH7 229 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 B3GNT9Q6UX72 402 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 PIK3AP1Q6ZUJ8 805 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 NIPA1Q7RTP0 329 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 TRMT1LQ7Z2T5 733 aaKnown RBP5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 TMEM199Q8N511 208 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 RCBTB1Q8NDN9 531 aa5.41□□□□□ -1.54
EXOSC3-204ENST00000465860 CCDC148Q8NFR7 591 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms