RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 NMUR2Q9GZQ4 415 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 STRIP2Q9ULQ0 834 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 hCG_1818297A0A087WSY0 165 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 PI4K2BG5E9Z4 385 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 FKBP6O75344 327 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 CALCAP01258 141 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 WDR44Q5JSH3 913 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 C15orf39Q6ZRI6 1047 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 NIPA1Q7RTP0 329 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 ST13P4Q8IZP2 240 aaPredicted RBP20.69■□□□□ 0.9
SDF4-205ENST00000465727 CYTH2Q99418 400 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 DDX56Q9NY93 547 aaKnown RBP20.69■□□□□ 0.9
SDF4-205ENST00000465727 CNTN3Q9P232 1028 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 RIMBP2O15034 1052 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 GDF11O95390 407 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 YWHABP31946 246 aaKnown RBP20.68■□□□□ 0.9
SDF4-205ENST00000465727 HNRNPDQ14103 355 aaKnown RBP20.68■□□□□ 0.9
SDF4-205ENST00000465727 TMCO4Q5TGY1 634 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 PALM2Q8IXS6 379 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 SLC35B2Q8TB61 432 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 NDNQ99608 321 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 PI4K2AQ9BTU6 479 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 MIS12Q9H081 205 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 C1orf21Q9H246 121 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 PLA2G4CQ9UP65 541 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 H3BRJ5 948 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 GOLGA8RI6L899 631 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 DDX39AO00148 427 aaKnown RBP20.68■□□□□ 0.9
SDF4-205ENST00000465727 CREB3O43889 395 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 TCP10Q12799 353 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 TBC1D25Q3MII6 688 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 AAGABQ6PD74 315 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 KYAT3Q6YP21 454 aaKnown RBP20.68■□□□□ 0.9
SDF4-205ENST00000465727 RIPOR1Q6ZS17 1223 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 ACAD11Q709F0 780 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 TTC7BQ86TV6 843 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 RHPN2Q8IUC4 686 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 SP8Q8IXZ3 490 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 GPD1LQ8N335 351 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 NAT8LQ8N9F0 302 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 FBXO36Q8NEA4 188 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 C7orf26Q96N11 449 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 TUBGCP5Q96RT8 1024 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 TMEM121Q9BTD3 319 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 MRIQ9BWK5 157 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 ZC3H12CQ9C0D7 883 aaKnown RBP20.68■□□□□ 0.9
SDF4-205ENST00000465727 KLHL11Q9NVR0 708 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 ZDHHC7Q9NXF8 308 aa20.68■□□□□ 0.9
SDF4-205ENST00000465727 MYH9P35579 1960 aaKnown RBP20.67■□□□□ 0.9
SDF4-205ENST00000465727 IFNB1P01574 187 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 PIM1P11309 404 aaPredicted RBP20.67■□□□□ 0.9
SDF4-205ENST00000465727 PLCB3Q01970 1234 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 MARK2Q7KZI7 788 aaKnown RBP20.67■□□□□ 0.9
SDF4-205ENST00000465727 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 CPT1BQ92523 772 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 WWP1Q9H0M0 922 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 IRAK4Q9NWZ3 460 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.67■□□□□ 0.9
SDF4-205ENST00000465727 FAM198AQ9UFP1 575 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 TAGLN3Q9UI15 199 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 EFR3BQ9Y2G0 817 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 IKBKGQ9Y6K9 419 aa20.67■□□□□ 0.9
SDF4-205ENST00000465727 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.67■□□□□ 0.9
SDF4-205ENST00000465727 SPECC1L-ADORA2AF8WAN1 911 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 GOLGA8SH3BPF8 625 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 GOLGA8MH3BSY2 632 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 BANF1O75531 89 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 PENKP01210 267 aaPredicted RBP20.66■□□□□ 0.9
SDF4-205ENST00000465727 ZCCHC18P0CG32 403 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 BGNP21810 368 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 CDC16Q13042 620 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 DMP1Q13316 513 aaPredicted RBP20.66■□□□□ 0.9
SDF4-205ENST00000465727 ATP13A4Q4VNC1 1196 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 SH3BP5LQ7L8J4 393 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 C4orf19Q8IY42 314 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 ULK2Q8IYT8 1036 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 PDIK1LQ8N165 341 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 NME8Q8N427 588 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 RBM15BQ8NDT2 890 aaKnown RBP20.66■□□□□ 0.9
SDF4-205ENST00000465727 POMGNT1Q8WZA1 660 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 TTC17Q96AE7 1141 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 FAM111AQ96PZ2 611 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 ALG13Q9NP73 1137 aaKnown RBP20.66■□□□□ 0.9
SDF4-205ENST00000465727 KCNH7Q9NS40 1196 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 A0A1B0GVG6 124 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 TMEM191CA6NGB0 347 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 I3L4J1 428 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 DHX15O43143 795 aaKnown RBP20.66■□□□□ 0.9
SDF4-205ENST00000465727 FAM155BO75949 473 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 TMEM191BP0C7N4 346 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 ITGB5P18084 799 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 GARTP22102 1010 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 CDKN2BP42772 138 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 RTP1P59025 263 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 PTK7Q13308 1070 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 BRDTQ58F21 947 aaPredicted RBP20.66■□□□□ 0.9
SDF4-205ENST00000465727 FNBP1LQ5T0N5 605 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 TTC13Q8NBP0 860 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 PANX3Q96QZ0 392 aa20.66■□□□□ 0.9
SDF4-205ENST00000465727 KLF6Q99612 283 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms