RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 MMTAG2Q9BU76 263 aaKnown RBP3.78□□□□□ -1.8
SNX4-202ENST00000465505 AS3MTQ9HBK9 375 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 TRPV5Q9NQA5 729 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 CHST12Q9NRB3 414 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 TDP1Q9NUW8 608 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 JKAMPQ9P055 326 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 TUBD1Q9UJT1 453 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 NEU2Q9Y3R4 380 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 EID1Q9Y6B2 187 aa3.78□□□□□ -1.8
SNX4-202ENST00000465505 TMEM94Q12767 1356 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 PIK3R4Q99570 1358 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 AOX1Q06278 1338 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 WDR27A2RRH5 827 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 GTPBP10A4D1E9 387 aaKnown RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 VWC2LB2RUY7 222 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 CCDC175P0C221 793 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 U2AF1L5P0DN76 240 aaPredicted RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 GPD1P21695 349 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 ANXA11P50995 505 aaKnown RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 ZNF131P52739 623 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 SOX10P56693 466 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 ZNF280AP59817 542 aaPredicted RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 CDC42EP1Q00587 391 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 U2AF1Q01081 240 aaKnown RBP eCLIP3.77□□□□□ -1.81
SNX4-202ENST00000465505 ZNF844Q08AG5 666 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 TRIM29Q14134 588 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 FILIP1LQ4L180 1135 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 HYIQ5T013 277 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 ANKRD45Q5TZF3 282 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 CTR9Q6PD62 1173 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 C1QL2Q7Z5L3 287 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 RSPH3Q86UC2 560 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 SAMD14Q8IZD0 417 aaPredicted RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 CFAP52Q8N1V2 620 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 TEX9Q8N6V9 391 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 PAF1Q8N7H5 531 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 TOR1AIP2Q8NFQ8 470 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 FBXO41Q8TF61 875 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 SCARB1Q8WTV0 552 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 JADE3Q92613 823 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 DPF1Q92782 380 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 TEKT1Q969V4 418 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 SYAP1Q96A49 352 aaPredicted RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 MRGPRX4Q96LA9 322 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 DMRTA2Q96SC8 542 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 MPHOSPH6Q99547 160 aaKnown RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 C1QTNF7Q9BXJ2 289 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 SLC29A3Q9BZD2 475 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 DHX36Q9H2U1 1008 aaKnown RBP3.77□□□□□ -1.81
SNX4-202ENST00000465505 EPS15L1Q9UBC2 864 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 RNF7Q9UBF6 113 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 SLC45A2Q9UMX9 530 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 CDYLQ9Y232 598 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 KNSTRNQ9Y448 316 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 IKBKGQ9Y6K9 419 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 KAT6AQ92794 2004 aa3.77□□□□□ -1.81
SNX4-202ENST00000465505 C19orf81C9J6K1 198 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 SGTAO43765 313 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 NDUFS2O75306 463 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 ERBB2P04626 1255 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 TPM3P06753 285 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 SETSIPP0DME0 302 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 EDNRBP24530 442 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 CNGA1P29973 690 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 ALDH1B1P30837 517 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 HLXQ14774 488 aaPredicted RBP3.76□□□□□ -1.81
SNX4-202ENST00000465505 TAF7Q15545 349 aaPredicted RBP3.76□□□□□ -1.81
SNX4-202ENST00000465505 CLUL1Q15846 466 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 TXNRD1Q16881 649 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 EPHA10Q5JZY3 1008 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 SLC10A5Q5PT55 438 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 TSTD2Q5T7W7 516 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 JAKMIP3Q5VZ66 844 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 PGM2L1Q6PCE3 622 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 MICALCLQ6ZW33 695 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 PTF1AQ7RTS3 328 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 SUGP1Q8IWZ8 645 aaKnown RBP3.76□□□□□ -1.81
SNX4-202ENST00000465505 ADGRG5Q8IZF4 528 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 CBARPQ8N350 705 aaPredicted RBP3.76□□□□□ -1.81
SNX4-202ENST00000465505 MYCBPAPQ8TBZ2 947 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 ZFPM2Q8WW38 1151 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 SMG7Q92540 1137 aaKnown RBP3.76□□□□□ -1.81
SNX4-202ENST00000465505 TBC1D20Q96BZ9 403 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 XPO4Q9C0E2 1151 aaKnown RBP3.76□□□□□ -1.81
SNX4-202ENST00000465505 SAP30BPQ9UHR5 308 aaKnown RBP3.76□□□□□ -1.81
SNX4-202ENST00000465505 ADAM21Q9UKJ8 722 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 LIMCH1Q9UPQ0 1083 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 IPPQ9Y573 584 aa3.76□□□□□ -1.81
SNX4-202ENST00000465505 CCDC195A0A1B0GUA6 201 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 MANSC4A6NHS7 340 aaPredicted RBP3.75□□□□□ -1.81
SNX4-202ENST00000465505 LINC00473A8K010 186 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 E7ENX8 843 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 NPHP1O15259 732 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 HTRA2O43464 458 aaPredicted RBP3.75□□□□□ -1.81
SNX4-202ENST00000465505 CHRM2P08172 466 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 CELA2AP08217 269 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 MYL3P08590 195 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 PPP3CBP16298 524 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 CAPN2P17655 700 aa3.75□□□□□ -1.81
SNX4-202ENST00000465505 C5AR1P21730 350 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms