RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NR2E1Q9Y466 385 aa21.65■■□□□ 1.06
SKA3-205ENST00000465471 C2CD4DB7Z1M9 353 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 CD58P19256 250 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 FSHRP23945 695 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 TBXAS1P24557 533 aaPredicted RBP21.64■■□□□ 1.05
SKA3-205ENST00000465471 SLC5A9Q2M3M2 681 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 VSTM1Q6UX27 236 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 ACOT1Q86TX2 421 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 CREBRFQ8IUR6 639 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 LEMD2Q8NC56 503 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 RPGRIP1Q96KN7 1286 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 ZNF512Q96ME7 567 aaPredicted RBP21.64■■□□□ 1.05
SKA3-205ENST00000465471 NT5C1BQ96P26 610 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 NT5C1AQ9BXI3 368 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 B3GNT5Q9BYG0 378 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 ELOVL4Q9GZR5 314 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 INTS2Q9H0H0 1204 aaKnown RBP21.64■■□□□ 1.05
SKA3-205ENST00000465471 FANCLQ9NW38 375 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 GCNT4Q9P109 453 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 GREB1Q4ZG55 1949 aa21.64■■□□□ 1.05
SKA3-205ENST00000465471 ZNF18P17022 549 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 GPR15P49685 360 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 CYP27A1Q02318 531 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 GCNT1Q02742 428 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 LRMPQ12912 555 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 ORC1Q13415 861 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 NFKBIBQ15653 356 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 VWA3BQ502W6 1294 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 IQCEQ6IPM2 695 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 PAQR9Q6ZVX9 377 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 OTOP3Q7RTS5 596 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 GJD3Q8N144 294 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 MYADMQ96S97 322 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 CORO1BQ9BR76 489 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 NAT10Q9H0A0 1025 aaKnown RBP21.63■■□□□ 1.05
SKA3-205ENST00000465471 NDST4Q9H3R1 872 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 TMEM30AQ9NV96 361 aa21.63■■□□□ 1.05
SKA3-205ENST00000465471 NRG2O14511 850 aaPredicted RBP21.62■■□□□ 1.05
SKA3-205ENST00000465471 MICAL2O94851 1124 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 BDNFP23560 247 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 CCR2P41597 374 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 RPL10AP62906 217 aaKnown RBP21.62■■□□□ 1.05
SKA3-205ENST00000465471 VEPH1Q14D04 833 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 ZSCAN23Q3MJ62 389 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 TRIM65Q6PJ69 517 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 GET4Q7L5D6 327 aaPredicted RBP21.62■■□□□ 1.05
SKA3-205ENST00000465471 DNAJB7Q7Z6W7 309 aaPredicted RBP21.62■■□□□ 1.05
SKA3-205ENST00000465471 ITIH5Q86UX2 942 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 ARHGEF19Q8IW93 802 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 ZDHHC14Q8IZN3 488 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 HS6ST3Q8IZP7 471 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 FUKQ8N0W3 1084 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 TDRD5Q8NAT2 981 aaKnown RBP21.62■■□□□ 1.05
SKA3-205ENST00000465471 ITFG1Q8TB96 612 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 CEP295NLQ96MC4 621 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 ZNF518BQ9C0D4 1074 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 ASAH2Q9NR71 780 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.62■■□□□ 1.05
SKA3-205ENST00000465471 EPS15L1Q9UBC2 864 aa21.62■■□□□ 1.05
SKA3-205ENST00000465471 OBSL1O75147 1896 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 MOSPD3O75425 235 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 PRKCSHP14314 528 aaPredicted RBP21.61■■□□□ 1.05
SKA3-205ENST00000465471 HMGA1P17096 107 aaKnown RBP21.61■■□□□ 1.05
SKA3-205ENST00000465471 ACO1P21399 889 aaKnown RBP21.61■■□□□ 1.05
SKA3-205ENST00000465471 SP100P23497 879 aaPredicted RBP21.61■■□□□ 1.05
SKA3-205ENST00000465471 CACNA2D1P54289 1103 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 RAD23BP54727 409 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 KRT31Q15323 416 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 DDR2Q16832 855 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 PHLDB3Q6NSJ2 640 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 GBP6Q6ZN66 633 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 FAM35AQ86V20 835 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 DHX40Q8IX18 779 aaKnown RBP21.61■■□□□ 1.05
SKA3-205ENST00000465471 AOPEPQ8N6M6 819 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 SLC4A11Q8NBS3 891 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 KAT5Q92993 513 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 SPATA17Q96L03 361 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 C8orf48Q96LL4 319 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 CRACR2AQ9BSW2 395 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 ZNF334Q9HCZ1 680 aaPredicted RBP21.61■■□□□ 1.05
SKA3-205ENST00000465471 PATJQ8NI35 1801 aa21.61■■□□□ 1.05
SKA3-205ENST00000465471 CUL9Q8IWT3 2517 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 CLDN5O00501 218 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 NOL4O94818 638 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 YWHAEP62258 255 aaKnown RBP21.6■■□□□ 1.05
SKA3-205ENST00000465471 EXOC3L4Q17RC7 722 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 DPY19L2P1Q6NXN4 242 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 PDZD4Q76G19 769 aaPredicted RBP21.6■■□□□ 1.05
SKA3-205ENST00000465471 NPAS3Q8IXF0 933 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 PLCD3Q8N3E9 789 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 PPM1KQ8N3J5 372 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 C12orf29Q8N999 325 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 GPR152Q8TDT2 470 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 GIPC2Q8TF65 315 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 FGF13Q92913 245 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 ACSF2Q96CM8 615 aaPredicted RBP21.6■■□□□ 1.05
SKA3-205ENST00000465471 TCEAL4Q96EI5 215 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 KREMEN1Q96MU8 473 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 IL21Q9HBE4 155 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 LIMA1Q9UHB6 759 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms