RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 C3orf70A6NLC5 250 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-204ENST00000465425 HGSO14964 777 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-204ENST00000465425 EZRP15311 586 aaKnown RBP19.25■□□□□ 0.67
SYNE4-204ENST00000465425 NQO1P15559 274 aaKnown RBP19.25■□□□□ 0.67
SYNE4-204ENST00000465425 CA4P22748 312 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 PROZP22891 400 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 PSMC4P43686 418 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 RNF43Q68DV7 783 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 ANKMY2Q8IV38 441 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 PPIL6Q8IXY8 311 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 CEP120Q8N960 986 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 PYROXD1Q8WU10 500 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 RPF1Q9H9Y2 349 aaKnown RBP19.25■□□□□ 0.67
SYNE4-204ENST00000465425 KIF9Q9HAQ2 790 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 WDR35Q9P2L0 1181 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 SNCAIPQ9Y6H5 919 aa19.25■□□□□ 0.67
SYNE4-204ENST00000465425 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-204ENST00000465425 IL1R2P27930 398 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 ARL4CP56559 192 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 IRX3P78415 501 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-204ENST00000465425 DNAJC3Q13217 504 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 ACVR2BQ13705 512 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 GADL1Q6ZQY3 521 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 METTL5Q9NRN9 209 aaKnown RBP19.24■□□□□ 0.67
SYNE4-204ENST00000465425 TJP2Q9UDY2 1190 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 IGKV6-21A0A0C4DH24 114 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 ZBTB42B2RXF5 422 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 B4GALT5O43286 388 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 ARIH2O95376 493 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 CXCL8P10145 99 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 KDELR1P24390 212 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 SLC18A1P54219 525 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 GEMIN4P57678 1058 aaKnown RBP19.24■□□□□ 0.67
SYNE4-204ENST00000465425 KCNJ2P63252 427 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 MYO1EQ12965 1108 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 BBS12Q6ZW61 710 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 PLPPR4Q7Z2D5 763 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 EMC1Q8N766 993 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 KCTD6Q8NC69 237 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 PTPRHQ9HD43 1115 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 GPRC5DQ9NZD1 345 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 CYTH4Q9UIA0 394 aa19.24■□□□□ 0.67
SYNE4-204ENST00000465425 FARP1Q9Y4F1 1045 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-204ENST00000465425 IGF2BP3O00425 579 aaKnown RBP eCLIP19.23■□□□□ 0.67
SYNE4-204ENST00000465425 BANF1O75531 89 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 IL18RAPO95256 599 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 GJB1P08034 283 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 GBP2P32456 591 aaPredicted RBP19.23■□□□□ 0.67
SYNE4-204ENST00000465425 GDF10P55107 478 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 CDH8P55286 799 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 CCDC142Q17RM4 750 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 PREPLQ4J6C6 727 aaPredicted RBP19.23■□□□□ 0.67
SYNE4-204ENST00000465425 SMYD5Q6GMV2 418 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 ATP11CQ8NB49 1132 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 FBF1Q8TES7 1133 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 SPATA33Q96N06 139 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 CPXM1Q96SM3 734 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 C10orf88Q9H8K7 445 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 PCSK1NQ9UHG2 260 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 PNMA3Q9UL41 463 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 STARD13Q9Y3M8 1113 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 CSADQ9Y600 493 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 LGR5O75473 907 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 RNF8O76064 485 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 RPA3P35244 121 aaPredicted RBP19.23■□□□□ 0.67
SYNE4-204ENST00000465425 ORC1Q13415 861 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 RIPK1Q13546 671 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 E2F5Q15329 346 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 CELF3Q5SZQ8 465 aaKnown RBP19.23■□□□□ 0.67
SYNE4-204ENST00000465425 RFX6Q8HWS3 928 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 ARFGAP1Q8N6T3 406 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 LRRC8CQ8TDW0 803 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 DENND1AQ8TEH3 1009 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 TRAPPC12Q8WVT3 735 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 TBC1D31Q96DN5 1066 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 FZD8Q9H461 694 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 PHTF1Q9UMS5 762 aa19.23■□□□□ 0.67
SYNE4-204ENST00000465425 MAP2K2P36507 400 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 RAD23BP54727 409 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 SETDB1Q15047 1291 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 RASA2Q15283 850 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 HHATQ5VTY9 493 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 EEF1DP3Q658K8 133 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 XYLT1Q86Y38 959 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 DHX37Q8IY37 1157 aaKnown RBP19.22■□□□□ 0.67
SYNE4-204ENST00000465425 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 CPT1BQ92523 772 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 BCO2Q9BYV7 579 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 ADAM33Q9BZ11 813 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 PHACTR1Q9C0D0 580 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 A0A1B0GUA9 196 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 MAGEB2O15479 319 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 PGK2P07205 417 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 HIRAP54198 1017 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-204ENST00000465425 MGAT5Q09328 741 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 ZNF268Q14587 947 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-204ENST00000465425 PDK4Q16654 411 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 EFHC2Q5JST6 749 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 WLSQ5T9L3 541 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 EFCAB12Q6NXP0 572 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms