RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PRPF38BQ5VTL8 546 aaKnown RBP17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 RSPO2Q6UXX9 243 aaPredicted RBP17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 SLC47A2Q86VL8 602 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 FBXO22Q8NEZ5 403 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 OR10T2Q8NGX3 314 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 UBXN4Q92575 508 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 LPIN3Q9BQK8 851 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ZBP1Q9H171 429 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 TRIM10Q9UDY6 481 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ATP8B3O60423 1300 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 C2CD2LO14523 706 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 LILRB3O75022 631 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 PAEPP09466 180 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 CTSAP10619 480 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 FERP16591 822 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 PTPN1P18031 435 aaKnown RBP17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 MAGEA1P43355 309 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 ERVFC1P60507 584 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 AMPD2Q01433 879 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 UBE3AQ05086 875 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 CAMK1Q14012 370 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 SLC18A3Q16572 532 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 ZNF280DQ6N043 979 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 C12orf29Q8N999 325 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 TRIM58Q8NG06 486 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 POF1BQ8WVV4 589 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 AUTS2Q8WXX7 1259 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 SECISBP2LQ93073 1101 aaKnown RBP17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 TNIP3Q96KP6 325 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 TMEM209Q96SK2 561 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 SYT15Q9BQS2 421 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 CDH9Q9ULB4 789 aa17.97■□□□□ 0.47
EXOSC3-203ENST00000465229 H7C4K7 107 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 URODP06132 367 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 BPIFB4P59827 614 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 PSMC1P62191 440 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 PTK2Q05397 1052 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 KLHL30Q0D2K2 578 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 GPM6BQ13491 265 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 ELF2Q15723 593 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 PSMD5Q16401 504 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 CCDC142Q17RM4 750 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 PAPD7Q5XG87 772 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 LRRTM3Q86VH5 581 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 GPR65Q8IYL9 337 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 RNF10Q8N5U6 811 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 B3GALNT2Q8NCR0 500 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 TFAP2BQ92481 460 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 ZSWIM1Q9BR11 485 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 PDCL3Q9H2J4 239 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 CRTAC1Q9NQ79 661 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 MRPL17Q9NRX2 175 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 MTRRQ9UBK8 725 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 BACE2Q9Y5Z0 518 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 TRANK1O15050 2925 aa17.96■□□□□ 0.47
EXOSC3-203ENST00000465229 MYBPHLA2RUH7 354 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 OR6C75A6NL08 312 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 CYP11B1P15538 503 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 ERCC6LQ2NKX8 1250 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 INTS6LQ5JSJ4 861 aaKnown RBP17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 FAM171BQ6P995 826 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 RSRC2Q7L4I2 434 aaKnown RBP17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 TMC7Q7Z402 723 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 LRRN4CLQ8ND94 238 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 PKMYT1Q99640 499 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 GTF3C4Q9UKN8 822 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 KIAA1257Q9ULG3 409 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 NLRC5Q86WI3 1866 aa17.95■□□□□ 0.46
EXOSC3-203ENST00000465229 EPOPA6NHQ4 379 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 ADAM12O43184 909 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 CXCL14O95715 111 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 OR4Q2P0C623 313 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 CCDC172P0C7W6 258 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 CD19P15391 556 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 RPL17P18621 184 aaKnown RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 GNA15P30679 374 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 TSPY1Q01534 308 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 NOP9Q86U38 636 aaKnown RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 EPS8L1Q8TE68 723 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 ZNF606Q8WXB4 792 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 DDX1Q92499 740 aaKnown RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 TCF25Q9BQ70 676 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 CLSTN3Q9BQT9 956 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 OXCT2Q9BYC2 517 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 ZCWPW1Q9H0M4 648 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 TLR9Q9NR96 1032 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 NOCTQ9UK39 431 aaKnown RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 VDRP11473 427 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 BRD2P25440 801 aaKnown RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 CDR1P51861 262 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 GFPT1Q06210 699 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 MDH1BQ5I0G3 518 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 SLC8B1Q6J4K2 584 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 MRPL43Q8N983 215 aaKnown RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 MYCBPAPQ8TBZ2 947 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 GOLGA1Q92805 767 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms