RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ZNF512Q96ME7 567 aaPredicted RBP14.59□□□□□ -0.07
LIMD1-203ENST00000465039 INTS2Q9H0H0 1204 aaKnown RBP14.59□□□□□ -0.07
LIMD1-203ENST00000465039 CRISPLD1Q9H336 500 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 SAMSN1Q9NSI8 373 aaKnown RBP14.59□□□□□ -0.07
LIMD1-203ENST00000465039 TMLHEQ9NVH6 421 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 FANCLQ9NW38 375 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 LIMA1Q9UHB6 759 aaKnown RBP14.59□□□□□ -0.07
LIMD1-203ENST00000465039 NME7Q9Y5B8 376 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 CCL16O15467 120 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 PAEPP09466 180 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 PDGFRBP09619 1106 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 WEE2P0C1S8 567 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 CSH1P0DML2 217 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 CSH2P0DML3 217 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 ATF6P18850 670 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 RAP1GAPP47736 663 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 CDH8P55286 799 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 PSMC1P62191 440 aaKnown RBP14.58□□□□□ -0.08
LIMD1-203ENST00000465039 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 CYP4A22Q5TCH4 519 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 UBR7Q8N806 425 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 TDRD5Q8NAT2 981 aaKnown RBP14.58□□□□□ -0.08
LIMD1-203ENST00000465039 NXPE3Q969Y0 559 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 SMARCD1Q96GM5 515 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 MYRFLQ96LU7 910 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 SEPT5Q99719 369 aaPredicted RBP14.58□□□□□ -0.08
LIMD1-203ENST00000465039 HNRNPABQ99729 332 aaKnown RBP14.58□□□□□ -0.08
LIMD1-203ENST00000465039 GPR88Q9GZN0 384 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 PNPLA8Q9NP80 782 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 GDE1Q9NZC3 331 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 CEP72Q9P209 647 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 EPS15L1Q9UBC2 864 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 UXTQ9UBK9 157 aaPredicted RBP14.58□□□□□ -0.08
LIMD1-203ENST00000465039 APEX2Q9UBZ4 518 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 CNTN6Q9UQ52 1028 aa14.58□□□□□ -0.08
LIMD1-203ENST00000465039 VCANP13611 3396 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 NOL4O94818 638 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 RHOP08100 348 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 FSHRP23945 695 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 KRT31Q15323 416 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 STILQ15468 1287 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 MEA1Q16626 185 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 PDZD4Q76G19 769 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-203ENST00000465039 GRASPQ7Z6J2 395 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-203ENST00000465039 PPM1KQ8N3J5 372 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 FAM200AQ8TCP9 573 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 WHAMMQ8TF30 809 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 UHRF1Q96T88 793 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-203ENST00000465039 DPEP3Q9H4B8 488 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 CSNK1G1Q9HCP0 422 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 DMAP1Q9NPF5 467 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-203ENST00000465039 COMMD8Q9NX08 183 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 DNMT3BQ9UBC3 853 aaKnown RBP14.57□□□□□ -0.08
LIMD1-203ENST00000465039 DOCK8Q8NF50 2099 aa14.57□□□□□ -0.08
LIMD1-203ENST00000465039 LGALS16A8MUM7 142 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 HCRTO43612 131 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 ATP2C2O75185 946 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 LRRN2O75325 713 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 PON1P27169 355 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 ANXA13P27216 316 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 CDC25CP30307 473 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 PPP3CCP48454 512 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 MFAP3P55082 362 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 TPM4P67936 248 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 PRSS36Q5K4E3 855 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 FKBP15Q5T1M5 1219 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 ARHGAP17Q68EM7 881 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 DNAJB7Q7Z6W7 309 aaPredicted RBP14.56□□□□□ -0.08
LIMD1-203ENST00000465039 ACOT1Q86TX2 421 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 FAM35AQ86V20 835 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 GJD3Q8N144 294 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 AOPEPQ8N6M6 819 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 TTC9BQ8N6N2 239 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 TATDN2Q93075 761 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 TMEM176AQ96HP8 235 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 ARID3AQ99856 593 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 TTLL2Q9BWV7 592 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 APOL5Q9BWW9 433 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 LRRC3Q9BY71 257 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 HSD3B7Q9H2F3 369 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 PLCB1Q9NQ66 1216 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 HMGXB4Q9UGU5 601 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 CDH7Q9ULB5 785 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 SLC27A5Q9Y2P5 690 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 NCANO14594 1321 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 NOTCH4Q99466 2003 aa14.56□□□□□ -0.08
LIMD1-203ENST00000465039 PATJQ8NI35 1801 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 BECN2A8MW95 431 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 PFKLP17858 780 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 CD58P19256 250 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 ACO1P21399 889 aaKnown RBP14.55□□□□□ -0.08
LIMD1-203ENST00000465039 CYP2F1P24903 491 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 DDX6P26196 483 aaKnown RBP eCLIP14.55□□□□□ -0.08
LIMD1-203ENST00000465039 WEE1P30291 646 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 ZNF132P52740 706 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 RAD23BP54727 409 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 IQCB1Q15051 598 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms