RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 PPFIBP2Q8ND30 876 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 RBM15BQ8NDT2 890 aaKnown RBP13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 ACTL9Q8TC94 416 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 FBXL18Q96ME1 805 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 VPS11Q9H270 941 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 RANBP17Q9H2T7 1088 aaKnown RBP13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 ST6GALNAC4Q9H4F1 302 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 ZWILCHQ9H900 591 aa13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 RPL26L1Q9UNX3 145 aaKnown RBP13.21□□□□□ -0.3
CLCNKA-204ENST00000464764 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 RXRBP28702 533 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 NLRP11P59045 1033 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 MTMR1Q13613 665 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 PRKD1Q15139 912 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 CYP4A22Q5TCH4 519 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 OCEL1Q9H607 264 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 CYB561D2O14569 222 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 ITGBL1O95965 494 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 LYNP07948 512 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 CD48P09326 243 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 RPL22P35268 128 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 DGKZQ13574 1117 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 FAM43BQ6ZT52 329 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 TAS1R3Q7RTX0 852 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 UNC45BQ8IWX7 931 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF398Q8TD17 642 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 GBP5Q96PP8 586 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 PANX3Q96QZ0 392 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 EPAS1Q99814 870 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 ACSS3Q9H6R3 686 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 SHOC2Q9UQ13 582 aa13.2□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 CLRN2A0PK11 232 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 MAGEA13PA6NCF6 341 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 TMEM191CA6NGB0 347 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 TMEM191BP0C7N4 346 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 GSTT1P30711 240 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 CDKN2BP42772 138 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 ETV4P43268 484 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 KBTBD12Q3ZCT8 623 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 SPDYAQ5MJ70 313 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 DCUN1D2Q6PH85 259 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 RIPOR1Q6ZS17 1223 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 ATP11CQ8NB49 1132 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 IWS1Q96ST2 819 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 PARVAQ9NVD7 372 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 PPARGC1AQ9UBK2 798 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 PPM1HQ9ULR3 514 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 MTO1Q9Y2Z2 717 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 NUB1Q9Y5A7 615 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 SNCAIPQ9Y6H5 919 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 PTK7Q13308 1070 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 RASIP1Q5U651 963 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 PRPF39Q86UA1 669 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 CFAP61Q8NHU2 1237 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 FNBP1Q96RU3 617 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 DHRS4Q9BTZ2 278 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 MEI4A8MW99 385 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 ELK3P41970 407 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 BASP1P80723 227 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 CUL2Q13617 745 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 LAMB3Q13751 1172 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 TFDP3Q5H9I0 405 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 CEP128Q6ZU80 1094 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 NAT8LQ8N9F0 302 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 PCDH9Q9HC56 1237 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 TJP2Q9UDY2 1190 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 DRG1Q9Y295 367 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
CLCNKA-204ENST00000464764 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 TM9SF1O15321 606 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 CST8O60676 142 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 SORBS2O94875 1100 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ANPEPP15144 967 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 RTP1P59025 263 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 ZACNQ401N2 412 aa13.18□□□□□ -0.3
CLCNKA-204ENST00000464764 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms