RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 KCNK4Q9NYG8 393 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 CNTN3Q9P232 1028 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PLA2G4CQ9UP65 541 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 EFR3BQ9Y2G0 817 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 TBC1D30Q9Y2I9 924 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 WASF2Q9Y6W5 498 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ASTN2O75129 1339 aaPredicted RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 TMEM191CA6NGB0 347 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 CAPN14A8MX76 684 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 PI4K2BG5E9Z4 385 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 DDX39AO00148 427 aaKnown RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 LPXNO60711 386 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 TM7SF2O76062 418 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 GH2P01242 217 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 TMEM191BP0C7N4 346 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 ATF7P17544 494 aaPredicted RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 AMPD1P23109 780 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 CDK7P50613 346 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 HSD17B4P51659 736 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 ACTR3P61158 418 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 FKBP1AP62942 108 aaKnown RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 AP2B1P63010 937 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 TCP10Q12799 353 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 CBLBQ13191 982 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 HNRNPDQ14103 355 aaKnown RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 TFDP3Q5H9I0 405 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 TMCO4Q5TGY1 634 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 KAZNQ674X7 775 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 SLC39A4Q6P5W5 647 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 KYAT3Q6YP21 454 aaKnown RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 CDAN1Q8IWY9 1227 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP48-206ENST00000464577 CPT1BQ92523 772 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 EZH1Q92800 747 aaPredicted RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 PPP2R3CQ969Q6 453 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 MRRFQ96E11 262 aaKnown RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 C7orf26Q96N11 449 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 FAM210AQ96ND0 272 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 CYTH2Q99418 400 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 ECSITQ9BQ95 431 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 WDR83Q9BRX9 315 aaKnown RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 CENPKQ9BS16 269 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 PI4K2AQ9BTU6 479 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 SPATA16Q9BXB7 569 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 C17orf75Q9HAS0 396 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 AGO4Q9HCK5 861 aaKnown RBP7.65□□□□□ -1.18
USP48-206ENST00000464577 KCNH7Q9NS40 1196 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 ZDHHC7Q9NXF8 308 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 NDE1Q9NXR1 346 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 CNTN6Q9UQ52 1028 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 PPME1Q9Y570 386 aa7.65□□□□□ -1.18
USP48-206ENST00000464577 B2RBV5 119 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SGK1O00141 431 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 FKBP6O75344 327 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SPAG6O75602 509 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 MYL2P10916 166 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 GSTT1P30711 240 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SSTR1P30872 391 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CDKN2BP42772 138 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 NPTX2P47972 431 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 RPL26P61254 145 aaKnown RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 JAG1P78504 1218 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 TAP1Q03518 808 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 DMP1Q13316 513 aaPredicted RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 PSMD6Q15008 389 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CNPY1Q3B7I2 92 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ZACNQ401N2 412 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 C2CD6Q53TS8 623 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 FAM102BQ5T8I3 360 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 AAGABQ6PD74 315 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 IZUMO2Q6UXV1 221 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 C3orf62Q6ZUJ4 267 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SH2D5Q6ZV89 423 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ACAD11Q709F0 780 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CCNJLQ8IV13 435 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SCUBE1Q8IWY4 988 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SAMD3Q8N6K7 520 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 NIPA2Q8N8Q9 360 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 TTC13Q8NBP0 860 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 STKLD1Q8NE28 680 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 FBXO36Q8NEA4 188 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 B4GALNT2Q8NHY0 566 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CHURC1Q8WUH1 139 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 FAM161BQ96MY7 647 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 HAPLN3Q96S86 360 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 EPAS1Q99814 870 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 NTPCRQ9BSD7 190 aaKnown RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 NMUR2Q9GZQ4 415 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 GPRC5CQ9NQ84 441 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 KLHL11Q9NVR0 708 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 TAGLN3Q9UI15 199 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ZNRF3Q9ULT6 936 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 UBIAD1Q9Y5Z9 338 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 COMMD3-BMI1R4GMX3 469 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 TCRBV5S1A1TA0A578 114 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SPECC1L-ADORA2AF8WAN1 911 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ENTPD3O75355 529 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 BANF1O75531 89 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CSDE1O75534 798 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms