RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 DOCK8Q8NF50 2099 aa18.18■□□□□ 0.5
VPS52-215ENST00000464425 PTPN1P18031 435 aaKnown RBP18.17■□□□□ 0.5
VPS52-215ENST00000464425 ASPAP45381 313 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 EPHA5P54756 1037 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 MARSP56192 900 aaKnown RBP18.17■□□□□ 0.5
VPS52-215ENST00000464425 MTMR3Q13615 1198 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 VEPH1Q14D04 833 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 TAF12Q16514 161 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 DDR2Q16832 855 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 ANO6Q4KMQ2 910 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 C4orf50Q6ZRC1 276 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 TMC8Q8IU68 726 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 LEMD2Q8NC56 503 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 CCDC150Q8NCX0 1101 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 STKLD1Q8NE28 680 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 FBXL13Q8NEE6 735 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 MYCBPAPQ8TBZ2 947 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 PCED1BQ96HM7 432 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 C1QTNF1Q9BXJ1 281 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 LRRC3Q9BY71 257 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 THAP9Q9H5L6 903 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 ABCB6Q9NP58 842 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 RAB20Q9NX57 234 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 IGSF9Q9P2J2 1179 aa18.17■□□□□ 0.5
VPS52-215ENST00000464425 ZFP37Q9Y6Q3 630 aaPredicted RBP18.17■□□□□ 0.5
VPS52-215ENST00000464425 A0A1W2PRU2 124 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 MOSPD3O75425 235 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 BDNFP23560 247 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 ORC1Q13415 861 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 TDGQ13569 410 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 HTR4Q13639 388 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 TEAD2Q15562 447 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 MAPRE1Q15691 268 aaKnown RBP18.16■□□□□ 0.5
VPS52-215ENST00000464425 TPD52L1Q16890 204 aaPredicted RBP18.16■□□□□ 0.5
VPS52-215ENST00000464425 PARM1Q6UWI2 310 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 SCN4BQ8IWT1 228 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 B3GALNT2Q8NCR0 500 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 SHKBP1Q8TBC3 707 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 SLC35C1Q96A29 364 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 ZSWIM3Q96MP5 696 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 RPP25Q9BUL9 199 aaKnown RBP18.16■□□□□ 0.5
VPS52-215ENST00000464425 C11orf16Q9NQ32 467 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 NUMBLQ9Y6R0 609 aa18.16■□□□□ 0.5
VPS52-215ENST00000464425 ANHXE9PGG2 379 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 NDST1P52848 882 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 RPL10AP62906 217 aaKnown RBP18.15■□□□□ 0.5
VPS52-215ENST00000464425 CFAP221Q4G0U5 840 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 ACOT1Q86TX2 421 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 CREBRFQ8IUR6 639 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 FGF14Q92915 247 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 FUBP3Q96I24 572 aaKnown RBP eCLIP18.15■□□□□ 0.5
VPS52-215ENST00000464425 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 GDE1Q9NZC3 331 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
VPS52-215ENST00000464425 TRIOO75962 3097 aa18.15■□□□□ 0.5
VPS52-215ENST00000464425 CLDN5O00501 218 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 NARSO43776 548 aaKnown RBP18.14■□□□□ 0.49
VPS52-215ENST00000464425 MICAL2O94851 1124 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 CD58P19256 250 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 GABRR2P28476 465 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 GRIK1P39086 918 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 ZNF165P49910 485 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 ZNF445P59923 1031 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 MYL5Q02045 173 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 WDR44Q5JSH3 913 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 TMEM31Q5JXX7 168 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 LRSAM1Q6UWE0 723 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 TRIM67Q6ZTA4 783 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 GAREM2Q75VX8 874 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 IRF2BP1Q8IU81 584 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 FAM114A1Q8IWE2 563 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 UBALD2Q8IYN6 164 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 SLC44A3Q8N4M1 653 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 TATDN2Q93075 761 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 NXPE3Q969Y0 559 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 TNIP3Q96KP6 325 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 KXD1Q9BQD3 176 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 B3GNT5Q9BYG0 378 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 BCO2Q9BYV7 579 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 ATXN3LQ9H3M9 355 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 HMGXB4Q9UGU5 601 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 NFE2L3Q9Y4A8 694 aa18.14■□□□□ 0.49
VPS52-215ENST00000464425 SMTNL1A8MU46 457 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 GPR37L1O60883 481 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 HMGA1P17096 107 aaKnown RBP18.13■□□□□ 0.49
VPS52-215ENST00000464425 MAGEA11P43364 429 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 FMO5P49326 533 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 FAM78AQ5JUQ0 283 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 VSTM1Q6UX27 236 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 MTSS1LQ765P7 747 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 GPIHBP1Q8IV16 184 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 ZNF518BQ9C0D4 1074 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 SLITRK6Q9H5Y7 841 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 CYP3A43Q9HB55 503 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 IL21Q9HBE4 155 aa18.13■□□□□ 0.49
VPS52-215ENST00000464425 TMEM221A6NGB7 291 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 SLC38A8A6NNN8 435 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 M0R296 226 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 CSH1P0DML2 217 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 CSH2P0DML3 217 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms