RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 CDH8P55286 799 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 CCL23P55773 120 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 DHX34Q14147 1143 aaKnown RBP15.37■□□□□ 0.05
COL5A1-205ENST00000464187 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 PLEKHG4Q58EX7 1191 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 DUPD1Q68J44 220 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 MON1BQ7L1V2 547 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 ZNF598Q86UK7 904 aaKnown RBP15.37■□□□□ 0.05
COL5A1-205ENST00000464187 PPP1R12CQ9BZL4 782 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 SDCBP2Q9H190 292 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 TSPYL2Q9H2G4 693 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-205ENST00000464187 C11orf49Q9H6J7 331 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 SMYD3Q9H7B4 428 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 SLC38A7Q9NVC3 462 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 MIOSQ9NXC5 875 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 ANAPC7Q9UJX3 599 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 PLAAQ9Y263 795 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 KIAA0100Q14667 2235 aaKnown RBP15.37■□□□□ 0.05
COL5A1-205ENST00000464187 TRIP11Q15643 1979 aa15.37■□□□□ 0.05
COL5A1-205ENST00000464187 MYBL1P10243 752 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 RRM1P23921 792 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 GNA15P30679 374 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 PTGIRP43119 386 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 SCNN1GP51170 649 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 ZNF132P52740 706 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 YWHAEP62258 255 aaKnown RBP15.36■□□□□ 0.05
COL5A1-205ENST00000464187 LLGL2Q6P1M3 1020 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 JAMLQ86YT9 394 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 LRRC45Q96CN5 670 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 C18orf8Q96DM3 657 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 CYFIP2Q96F07 1278 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 TRIM11Q96F44 468 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 TRIM31Q9BZY9 425 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 TRIM7Q9C029 511 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 CYP3A43Q9HB55 503 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 UBN1Q9NPG3 1134 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 SNX9Q9Y5X1 595 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 TCRBV7S2A1N4TA0A589 114 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 SHOX2O60902 331 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-205ENST00000464187 EOMESO95936 686 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 CHRNA3P32297 505 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 NSFP46459 744 aaKnown RBP15.36■□□□□ 0.05
COL5A1-205ENST00000464187 HNRNPH2P55795 449 aaKnown RBP15.36■□□□□ 0.05
COL5A1-205ENST00000464187 NOMO3P69849 1222 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 SIX1Q15475 284 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-205ENST00000464187 ZSCAN26Q16670 478 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 TTC27Q6P3X3 843 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 LRIG3Q6UXM1 1119 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 TRIM72Q6ZMU5 477 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 LEKR1Q6ZMV7 388 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 SLC13A5Q86YT5 568 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-205ENST00000464187 PASD1Q8IV76 773 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 ZNF560Q96MR9 790 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 ERP44Q9BS26 406 aa15.36■□□□□ 0.05
COL5A1-205ENST00000464187 H0YGN5 161 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 POMCP01189 267 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 LRPAP1P30533 357 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 SSTR3P32745 418 aaPredicted RBP15.35■□□□□ 0.05
COL5A1-205ENST00000464187 CYP2C18P33260 490 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 PNPLA4P41247 253 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 RWDD2BP57060 319 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 FAM189BP81408 668 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 CYP1B1Q16678 543 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 LRRC26Q2I0M4 334 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 C2CD6Q53TS8 623 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 TMC3Q7Z5M5 1100 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 PHLDB2Q86SQ0 1253 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 SH2D3CQ8N5H7 860 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 SEPT8Q92599 483 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 PCYOX1Q9UHG3 505 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 TBX21Q9UL17 535 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 NFS1Q9Y697 457 aa15.35■□□□□ 0.05
COL5A1-205ENST00000464187 KPNA7A9QM74 516 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 SPTLC1O15269 473 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 CILPO75339 1184 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 PARNO95453 639 aaKnown RBP15.34■□□□□ 0.05
COL5A1-205ENST00000464187 CLTBP09497 229 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 TAF6P49848 677 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 SMYD5Q6GMV2 418 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 NECAB2Q7Z6G3 386 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 APBB2Q92870 758 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 MAGOHBQ96A72 148 aaKnown RBP15.34■□□□□ 0.05
COL5A1-205ENST00000464187 ZDHHC18Q9NUE0 388 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 TMEM39AQ9NV64 488 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 CACNG4Q9UBN1 327 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 RASAL2Q9UJF2 1139 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 INPP5FQ9Y2H2 1132 aa15.34■□□□□ 0.05
COL5A1-205ENST00000464187 ENPP3O14638 875 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 THAP12O43422 761 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 LILRA4P59901 499 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 MTMR3Q13615 1198 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 KCTD16Q68DU8 428 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 LRRC31Q6UY01 552 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 ZNF606Q8WXB4 792 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 FMO2Q99518 471 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 C11orf70Q9BRQ4 267 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 TXLNGYQ9BZA5 131 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 MCOLN1Q9GZU1 580 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 FAM124BQ9H5Z6 455 aaPredicted RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms