RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ITPRIPL2Q3MIP1 535 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 RESP18Q5W5W9 173 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 LMBRD2Q68DH5 695 aaPredicted RBP15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 TSSK4Q6SA08 328 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 ERMP1Q7Z2K6 904 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 OSTM1Q86WC4 334 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 SYNPOQ8N3V7 929 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 SCFD1Q8WVM8 642 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 MRPS31Q92665 395 aaKnown RBP15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 ZFYVE19Q96K21 471 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 CEP295NLQ96MC4 621 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 GTSE1Q9NYZ3 720 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 CFAP45Q9UL16 551 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 PCDHA7Q9UN72 937 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 DENND4CQ5VZ89 1909 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 WARSP23381 471 aaKnown RBP15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 ME1P48163 572 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 SOX9P48436 509 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 GPR15P49685 360 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 GAS6Q14393 721 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 PSMD6Q15008 389 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 DDR2Q16832 855 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 FOXD4L5Q5VV16 416 aaPredicted RBP15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 TXNDC11Q6PKC3 985 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 C4orf50Q6ZRC1 276 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 HS2ST1Q7LGA3 356 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 TRAPPC11Q7Z392 1133 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 SPATA2LQ8IUW3 424 aaPredicted RBP15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 C12orf56Q8IXR9 622 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 GPR161Q8N6U8 529 aaKnown RBP15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 MAB21L3Q8N8X9 362 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 XXYLT1Q8NBI6 393 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 KBTBD7Q8WVZ9 684 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 FOXD4L4Q8WXT5 416 aaPredicted RBP15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 USP13Q92995 863 aaPredicted RBP15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 HINFPQ9BQA5 517 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 FAM83CQ9BQN1 747 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 TDP1Q9NUW8 608 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 RCOR1Q9UKL0 485 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 CDH9Q9ULB4 789 aa15.39■□□□□ 0.05
SNRNP40-203ENST00000463988 TNK2Q07912 1038 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 CYP24A1Q07973 514 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 CCINQ13939 588 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 SDHAF4Q5VUM1 108 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 TXNDC8Q6A555 127 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 VSTM1Q6UX27 236 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 KIAA2013Q8IYS2 634 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 SECISBP2LQ93073 1101 aaKnown RBP15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 SPATA17Q96L03 361 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 FNBP1Q96RU3 617 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 CGRRF1Q99675 332 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 SYT15Q9BQS2 421 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 SMG9Q9H0W8 520 aaKnown RBP15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 GKN1Q9NS71 199 aa15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 MAGED2Q9UNF1 606 aaPredicted RBP15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 SMG5Q9UPR3 1016 aaKnown RBP15.38■□□□□ 0.05
SNRNP40-203ENST00000463988 KIF26AQ9ULI4 1882 aaPredicted RBP15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 DMXL1Q9Y485 3027 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 TACC1O75410 805 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 STAU1O95793 577 aaKnown RBP15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 DLATP10515 647 aaKnown RBP15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 TNNI1P19237 187 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 LMO2P25791 158 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 HOXA6P31267 233 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 CYP2J2P51589 502 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 AMPD2Q01433 879 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 SATB1Q01826 763 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 PON2Q15165 354 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 WDR44Q5JSH3 913 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 NELFCDQ8IXH7 590 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 DCLK2Q8N568 766 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 TTC8Q8TAM2 541 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 GOLGA5Q8TBA6 731 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 BLZF1Q9H2G9 400 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 NCDNQ9UBB6 729 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 MAGEC2Q9UBF1 373 aaPredicted RBP15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 CCL26Q9Y258 94 aa15.37■□□□□ 0.05
SNRNP40-203ENST00000463988 CLIC2O15247 247 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 HCRTO43612 131 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 TADA3O75528 432 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 SLFN14P0C7P3 912 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 FAM160A1Q05DH4 1040 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 CUL4BQ13620 913 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 RUNX3Q13761 415 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 PDGFRLQ15198 375 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 CCDC142Q17RM4 750 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 KNOP1Q1ED39 458 aaKnown RBP15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 FOXD4L6Q3SYB3 417 aaPredicted RBP15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 CC2D1AQ6P1N0 951 aaPredicted RBP15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 FOXD4L3Q6VB84 417 aaPredicted RBP15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 SCN4BQ8IWT1 228 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 CEP57L1Q8IYX8 460 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 FSIP1Q8NA03 581 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 MYCBPAPQ8TBZ2 947 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 TMEM174Q8WUU8 243 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 CCDC127Q96BQ5 260 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 MMS19Q96T76 1030 aa15.36■□□□□ 0.05
SNRNP40-203ENST00000463988 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms