RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 HHIPQ96QV1 700 aa18.6■□□□□ 0.57
HMGN1-209ENST00000463631 PKMYT1Q99640 499 aa18.6■□□□□ 0.57
HMGN1-209ENST00000463631 ACBD6Q9BR61 282 aa18.6■□□□□ 0.57
HMGN1-209ENST00000463631 STRA6Q9BX79 667 aa18.6■□□□□ 0.57
HMGN1-209ENST00000463631 DUSP15Q9H1R2 295 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-209ENST00000463631 ECT2Q9H8V3 914 aa18.6■□□□□ 0.57
HMGN1-209ENST00000463631 CACNA1GO43497 2377 aa18.6■□□□□ 0.57
HMGN1-209ENST00000463631 PRPF40AO75400 957 aaKnown RBP18.59■□□□□ 0.57
HMGN1-209ENST00000463631 KCNK5O95279 499 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 APBB3O95704 486 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 GPR15P49685 360 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 RABEP1Q15276 862 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 ELF2Q15723 593 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 CFAP221Q4G0U5 840 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 INTS6LQ5JSJ4 861 aaKnown RBP18.59■□□□□ 0.57
HMGN1-209ENST00000463631 ZNF720Q7Z2F6 126 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 BRSK2Q8IWQ3 736 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 LRRC52Q8N7C0 313 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 RASSF8Q8NHQ8 419 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 POMGNT1Q8WZA1 660 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 ATP2A3Q93084 1043 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 PI4K2AQ9BTU6 479 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 SEL1LQ9UBV2 794 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 L1RE1Q9UN81 338 aa18.59■□□□□ 0.57
HMGN1-209ENST00000463631 MAGED2Q9UNF1 606 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-209ENST00000463631 NUP205Q92621 2012 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 USP17L7P0C7H9 530 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 TCF3P15923 654 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 GJB2P29033 226 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 GRIN1Q05586 938 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 EML3Q32P44 896 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 RNF43Q68DV7 783 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 NAIF1Q69YI7 327 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-209ENST00000463631 SFR1Q86XK3 245 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 KRI1Q8N9T8 703 aaKnown RBP18.58■□□□□ 0.56
HMGN1-209ENST00000463631 STKLD1Q8NE28 680 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 RPLP0P6Q8NHW5 317 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 CCDC26Q8TAB7 109 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 CXorf38Q8TB03 319 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 CD101Q93033 1021 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 FUBP3Q96I24 572 aaKnown RBP eCLIP18.58■□□□□ 0.56
HMGN1-209ENST00000463631 IKZF4Q9H2S9 585 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 SMOC1Q9H4F8 434 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 POLR3BQ9NW08 1133 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-209ENST00000463631 GDAP2Q9NXN4 497 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 DDX43Q9NXZ2 648 aaKnown RBP18.58■□□□□ 0.56
HMGN1-209ENST00000463631 ATRXP46100 2492 aa18.58■□□□□ 0.56
HMGN1-209ENST00000463631 TRAV19A0A0A6YYK7 116 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 BCLAF3A2AJT9 711 aaKnown RBP18.57■□□□□ 0.56
HMGN1-209ENST00000463631 RHOBTB1O94844 696 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 ITGB3P05106 788 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 CKMP06732 381 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 CYP2F1P24903 491 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
HMGN1-209ENST00000463631 DDIT3P35638 169 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 WNT7BP56706 349 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 MYL7Q01449 175 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 DMC1Q14565 340 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 DDR2Q16832 855 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 SDHAF4Q5VUM1 108 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 TCEAL6Q6IPX3 200 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 BRAPQ7Z569 592 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 C11orf74Q86VG3 221 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 C1orf127Q8N9H9 656 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 TCEAL3Q969E4 200 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 TMX3Q96JJ7 454 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 SLC22A12Q96S37 553 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 DUS2Q9NX74 493 aaKnown RBP18.57■□□□□ 0.56
HMGN1-209ENST00000463631 STK17AQ9UEE5 414 aa18.57■□□□□ 0.56
HMGN1-209ENST00000463631 PKD1L2Q7Z442 2459 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 HUS1O60921 280 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 IFNAR2P48551 515 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 TFAMQ00059 246 aaKnown RBP18.56■□□□□ 0.56
HMGN1-209ENST00000463631 TOP6BLQ8N6T0 577 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 EDEM2Q9BV94 578 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 TRPC7Q9HCX4 862 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 GCNT4Q9P109 453 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 EXOC7Q9UPT5 735 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 WNT6Q9Y6F9 365 aa18.56■□□□□ 0.56
HMGN1-209ENST00000463631 PTPRDP23468 1912 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 GABRDO14764 452 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 GAP43P17677 238 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 ACAT1P24752 427 aaKnown RBP18.55■□□□□ 0.56
HMGN1-209ENST00000463631 PCSK1P29120 753 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 MAGEA11P43364 429 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 L1TD1Q5T7N2 865 aaKnown RBP18.55■□□□□ 0.56
HMGN1-209ENST00000463631 PMS2CLQ68D20 193 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 FSIP1Q8NA03 581 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 CACTINQ8WUQ7 758 aaKnown RBP18.55■□□□□ 0.56
HMGN1-209ENST00000463631 CEP295NLQ96MC4 621 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 FAM213AQ9BRX8 229 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 OLFML3Q9NRN5 406 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 GTF3C4Q9UKN8 822 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 ARHGAP26Q9UNA1 814 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
HMGN1-209ENST00000463631 LNP1A1A4G5 178 aa18.54■□□□□ 0.56
HMGN1-209ENST00000463631 CAVIN2O95810 425 aa18.54■□□□□ 0.56
HMGN1-209ENST00000463631 LDHAP00338 332 aaKnown RBP18.54■□□□□ 0.56
HMGN1-209ENST00000463631 PFKLP17858 780 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms