RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 WDR35Q9P2L0 1181 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 TJP2Q9UDY2 1190 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 KIAA0100Q14667 2235 aaKnown RBP20.09■□□□□ 0.81
CCDC78-206ENST00000463539 TCRBV5S1A1TA0A578 114 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 TMEM189-UBE2V1I3L0A0 370 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 SPOPO43791 374 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 TIMP1P01033 207 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 ERBB2P04626 1255 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 CYP11A1P05108 521 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 BCAT1P54687 386 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 TAP1Q03518 808 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 DCUN1D2Q6PH85 259 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 CREG2Q8IUH2 290 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 SYT15Q9BQS2 421 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 DNAJB4Q9UDY4 337 aa20.09■□□□□ 0.81
CCDC78-206ENST00000463539 PRG3Q9Y2Y8 225 aaPredicted RBP20.09■□□□□ 0.81
CCDC78-206ENST00000463539 CTAGE15A4D2H0 777 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 MIF4GDA9UHW6 222 aaKnown RBP20.08■□□□□ 0.8
CCDC78-206ENST00000463539 ATP2C2O75185 946 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 GJB6O95452 261 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 CTAGE8P0CG41 777 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 PCSK1P29120 753 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 GABRB2P47870 512 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 GSCP56915 257 aaPredicted RBP20.08■□□□□ 0.8
CCDC78-206ENST00000463539 BST2Q10589 180 aaKnown RBP20.08■□□□□ 0.8
CCDC78-206ENST00000463539 CCDC181Q5TID7 509 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 CTAGE6Q86UF2 777 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 XYLT1Q86Y38 959 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 CTAGE4Q8IX94 777 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 UBE2Q2Q8WVN8 375 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 MCEEQ96PE7 176 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 SELENOOQ9BVL4 669 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 CDH9Q9ULB4 789 aa20.08■□□□□ 0.8
CCDC78-206ENST00000463539 TRIM43BA6NCK2 446 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 GOLGA8SH3BPF8 625 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 CES2O00748 559 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 KIAA0355O15063 1070 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 TADA3O75528 432 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 PROSCO94903 275 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 TKTP29401 623 aaKnown RBP20.07■□□□□ 0.8
CCDC78-206ENST00000463539 PDE4CQ08493 712 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 ZNF268Q14587 947 aaPredicted RBP20.07■□□□□ 0.8
CCDC78-206ENST00000463539 MDH1BQ5I0G3 518 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 PPP1R15BQ5SWA1 713 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 UBL4BQ8N7F7 174 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 STK32AQ8WU08 396 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 TRIM43Q96BQ3 446 aaPredicted RBP20.07■□□□□ 0.8
CCDC78-206ENST00000463539 PBKQ96KB5 322 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 HNRNPABQ99729 332 aaKnown RBP20.07■□□□□ 0.8
CCDC78-206ENST00000463539 MCOLN1Q9GZU1 580 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 CRTAC1Q9NQ79 661 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 LCMT1Q9UIC8 334 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 SCN5AQ14524 2016 aa20.07■□□□□ 0.8
CCDC78-206ENST00000463539 TMEM191CA6NGB0 347 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 TBKBP1A7MCY6 615 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 EFCAB8A8MWE9 144 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 E5RJQ4 531 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 RAG1P15918 1043 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 TYMPP19971 482 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 SLC1A1P43005 524 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 RGS7P49802 495 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 SNX16P57768 344 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 RPL7AP62424 266 aaKnown RBP20.06■□□□□ 0.8
CCDC78-206ENST00000463539 CCDC142Q17RM4 750 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 KIAA0319Q5VV43 1072 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 OVOS1Q6IE37 1185 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 PMF1Q6P1K2 205 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCDC78-206ENST00000463539 FUKQ8N0W3 1084 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.06■□□□□ 0.8
CCDC78-206ENST00000463539 SLC35F5Q8WV83 523 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 VWCEQ96DN2 955 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 NRDE2Q9H7Z3 1164 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 RNF14Q9UBS8 474 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 PCDHB8Q9UN66 801 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 TDRD15B5MCY1 1934 aaKnown RBP20.06■□□□□ 0.8
CCDC78-206ENST00000463539 TET1Q8NFU7 2136 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 MYH10P35580 1976 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 TULP2O00295 520 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 DDX3YO15523 660 aaKnown RBP20.06■□□□□ 0.8
CCDC78-206ENST00000463539 TRAPPC3O43617 180 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 KRT3P12035 628 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 ITGB8P26012 769 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 PAFAH1B1P43034 410 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 SLC8A3P57103 927 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 CFAP221Q4G0U5 840 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 MED10Q9BTT4 135 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 SLC4A5Q9BY07 1137 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCDC78-206ENST00000463539 IP6K2Q9UHH9 426 aa20.06■□□□□ 0.8
CCDC78-206ENST00000463539 V9GYY5 206 aaPredicted RBP20.06■□□□□ 0.8
CCDC78-206ENST00000463539 SIGLEC16A6NMB1 481 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 PDE2AO00408 941 aaPredicted RBP20.05■□□□□ 0.8
CCDC78-206ENST00000463539 TADA2AO75478 443 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 CSF2RAP15509 400 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 CPNE8Q86YQ8 564 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 THEM5Q8N1Q8 247 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 LRRC43Q8N309 656 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 GOLGA1Q92805 767 aa20.05■□□□□ 0.8
CCDC78-206ENST00000463539 CD101Q93033 1021 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms